 |
Job Description | P0AB01 | Confidence | 40.50% | Date | Thu Jan 5 11:14:15 GMT 2012 |
Rank | 96 | Aligned Residues | 102 |
% Identity | 20% | Template | c2j5tF_ |
PDB info |
PDB header:transferase | Chain: F: PDB Molecule:glutamate 5-kinase; |
PDBTitle: glutamate 5-kinase from escherichia coli complexed with2 glutamate
|
Resolution | 2.90 Å |
|
 |
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
130 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|  |  | . | . | . | . | . | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Sequence |   |
Y | I | V | V | L | G | G | G | Y | T | W | N | P | Q | W | A | P | S | S | N | L | I | N | N | S | L | P | R | L | N | E | G | I | R | L | W | R | E | N | P | G | S | K | L | I | F | T | G | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
V | A | K | T | N | T | V | S | T | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Conservation |   |
|
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|
|   |
|
|
| . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
|
|
| . | . | . | . | . | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
|
|
|
|
|
|
|
|   |
|
|
|   |   | . | . | . | . |   |   |
|   |   |   |   |
|   |   |
|   |   |   |
|
|   |
|   |   |   |
|   |   |
|
|
|
|   |
|
|
|   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|
|
|
|
|   |   |
Template Sequence |   |
L | V | V | K | L | G | T | S | V | L | T | G | G | S | . |
. |
. |
. |
R | R | L | N | R | A | H | I | V | E | L | V | R | Q | C | A | Q | L | H | A | A | G | H | R | I | V | I | V | T | S | G | A | I | A | A | G | R | E | H | L | G | Y | P | E | L | P | A | T | I | A | S | K | Q | L | L | A | A | V | G | Q | S | R |
Template Known Secondary structure |   |
 |  |  |  |  |
|  |  |  |  |  | T | T | S | . | . | . | . | S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  | T | T | S |
|
|
|
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |
|
|
|
| . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | |
|
|
|
. | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
  |
  |   |
|
|
140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | |
|
|
. | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . |
Predicted Secondary structure |   |
. | . |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
| . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
Query SS confidence |   |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
E | V | G | A | R | V | A | Q | S | L | G | V | P | R | E | Q | I | I | T | L | D | L | . |
. |
. |
P | K | D | T | E | E | E | A | A | A | V | K | Q | A | I | G | D | A | P | F | L | L | V | T | S |
Query Conservation |   |
. | . |   |   |
|   |   |   |
|   |   |   |
|
|
|   |   |   |
|   |   |
|   |   | . | . | . |
|   |
|
|   |
|
|
|   |   |
|   |   |   |
|   |   |   |   |
|   |
|
|
|
|
Alig confidence |   |
. | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |
|
|
|
|
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|
|   |   |
|   |
|
|
|
|   |
Template Sequence |   |
L | I | Q | L | W | E | Q | L | F | S | I | Y | G | I | H | V | G | Q | M | L | L | T | R | A | D | M | E | D | R | E | R | F | L | N | A | R | D | T | L | R | A | L | L | D | N | N | V | V | P | V | I | N |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |
| G | G | G | G | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
83 | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|