Job Description P77375 Confidence 100.00% Date Thu Jan 5 12:28:17 GMT 2012 Rank 3 Aligned Residues 185 % Identity 38% Template c2vpyB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:nrfc protein; PDBTitle: polysulfide reductase with bound quinone inhibitor,2 pentachlorophenol (pcp) Resolution 2.50 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	Y	A	M	I	H	D	E	S	R	C	N	G	C	N	I	C	A	R	A	C	R	K	T	N	H	V	P	A	Q	G	S	R	L	S	I	A	H	I	P	V	T	D	N	D	N	E	T	Q	Y	H	F	F	R	Q	S	C	Q	H	C	E	D	A	P	C	I	D	V	C	P	T	G	A	S	W	R	D	E	Q
Query Conservation
Alig confidence																																										.
Template Conservation																																										.
Template Sequence		P	R	Y	A	M	A	I	D	L	S	L	C	V	G	C	A	A	C	A	V	A	C	K	M	E	N	E	V	P	P	G	V	F	N	L	W	I	R	E	R	.	E	V	G	E	Y	P	N	L	V	V	E	F	R	P	E	Q	C	L	H	C	E	N	P	P	C	V	P	V	C	P	T	G	A	S	Y	Q	T	K	D
Template Known Secondary structure										T	T	T															T				T	T			S							.					T	T	S														S	S		T	T	T	T	T		S	S	S						T	T
Template Predicted Secondary structure																																										.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.			.	.	.	.	.	190	.	.
Predicted Secondary structure																																																																								.	.
Query SS confidence																																																																								.	.
Query Sequence		G	I	V	R	V	E	K	S	Q	C	I	G	C	S	Y	C	I	G	A	C	P	Y	Q	V	R	Y	L	N	P	V	T	K	V	A	D	K	C	D	F	C	A	E	S	R	L	A	K	G	F	P	P	I	C	V	S	A	C	P	E	H	A	L	I	F	G	R	E	D	S	P	.	.	E	I	Q	A	W	L	Q	Q
Query Conservation																																																																								.	.
Alig confidence																																.												.																												.	.
Template Conservation																																.												.
Template Sequence		G	L	V	L	V	D	P	K	K	C	I	A	C	G	A	C	I	A	A	C	P	Y	D	A	R	Y	L	H	P	A	.	G	Y	V	S	K	C	T	F	C	A	H	.	R	L	E	K	G	K	V	P	A	C	V	E	T	C	P	T	Y	C	R	T	F	G	D	L	E	D	P	E	S	P	V	A	K	A	L	K	A
Template Known Secondary structure		S						T	T	T												T	T							T	T	.	S	S						T	T			.				T	T								S		T	T								T	T		T	T	S
Template Predicted Secondary structure																																.												.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
			193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.				.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure		.																				.	.	.
Query SS confidence		.																				.	.	.
Query Sequence		.	N	K	Y	Y	Q	Y	Q	L	P	G	A	G	K	P	H	L	Y	R	R	.	.	.	F	G	Q	H	L	I	K	K	E	N	V
Query Conservation		.																				.	.	.
Alig confidence		.																				.	.	.
Template Conservation
Template Sequence		A	E	R	V	D	V	L	R	P	E	Q	G	T	R	P	K	L	F	Y	L	N	A	P	S	K	K	G	L	T	R	E	S	E	V
Template Known Secondary structure			S					S	S	T	T	S	S				S					S		S	S	T	T		S			G	G	G
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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