Job Description P77375 Confidence 97.99% Date Thu Jan 5 12:28:17 GMT 2012 Rank 50 Aligned Residues 102 % Identity 17% Template c2fugC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:nadh-quinone oxidoreductase chain 3; PDBTitle: crystal structure of the hydrophilic domain of respiratory complex i2 from thermus thermophilus Resolution 3.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	I	H	D	E	S	R	C	N	G	C	N	I	C	A	R	A	C	R	K	T	N	H	V	P	A	Q	G	S	R	L	S	I	A	H	I	P	V	T	D	N	D	N	E	T	Q	Y	H	F	F	R	Q	S	C	Q	H	C	E	D	A	P	C	I	D	V	C	P	T	G	A	S	W	R	D	E	Q	G	I	V	R
Query Conservation
Alig confidence																																																.	.	.	.	.	.	.							.	.
Template Conservation																																																.	.	.	.	.	.	.							.	.
Template Sequence		V	I	L	D	R	E	R	C	I	H	C	K	R	C	V	R	Y	F	E	E	V	P	G	D	E	V	L	D	F	I	E	R	G	V	H	T	F	I	G	T	M	D	F	G	L	P	.	.	.	.	.	.	.	S	G	F	S	G	N	.	.	I	T	D	I	C	P	V	G	A	L	L	D	L	T	A	R	F	R	A
Template Known Secondary structure		S					S															T	T								B	S		G	G	G		B				S	S	T	T			.	.	.	.	.	.	.	S	S			T		.	.						S	S	S	S	S	B		G	G	G	S	S	S
Template Predicted Secondary structure																																																.	.	.	.	.	.	.							.	.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.								220	.	.	.	.	.			.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		119	120	.	.	.	.	.	.				.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.
Query SS confidence										.	.	.
Query Sequence		V	E	K	S	Q	C	I	G	.	.	.	C	S	Y	C	I	G	A	C	P	Y	Q	V	R	Y	L	N	P	V	T	K	V	A	D
Query Conservation										.	.	.
Alig confidence										.	.	.
Template Conservation
Template Sequence		R	N	W	E	M	E	E	T	P	T	T	C	A	L	C	P	V	G	C	G	I	T	A	D	T	R	S	G	E	L	L	R	I	R
Template Known Secondary structure			T	T	T	S									S	S	T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions