Return to main results Retrieve Phyre Job Id

Job DescriptionP64503
Confidence3.19%DateThu Jan 5 12:08:58 GMT 2012
Rank77Aligned Residues45
% Identity13%Templatec3kieF_
PDB info PDB header:virusChain: F: PDB Molecule:capsid protein vp1; PDBTitle: crystal structure of adeno-associated virus serotype 3b
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20... ... ...30.........40........
Predicted Secondary structure 





...

..











Query SS confidence 



















. . .


. .





















Query Sequence  SVRIGAFEIDDGELHGESPG. . . DRT. . LTIPCKSDPDLCMQLDAWDAET
Query Conservation   


  





 
      ...  
..




 

  









 
Alig confidence 



















...


..





















Template Conservation   
 
 







 
   


 
 




 

 
  
 



 
  
   
Template Sequence  SFKLFNIQVKEVTQNDGTTTIANNLTSTVQVFTDSEYQLPYVLGSAHQGC
Template Known Secondary structure 
SS

TT


S

S



SS

S

Template Predicted Secondary structure 






















Template SS confidence 

















































   312.......320.........330.........340.........350.........360.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions