Return to main results Retrieve Phyre Job Id

Job DescriptionP64503
Confidence7.77%DateThu Jan 5 12:08:58 GMT 2012
Rank16Aligned Residues40
% Identity15%Templatec2vscD_
PDB info PDB header:cell adhesionChain: D: PDB Molecule:leukocyte surface antigen cd47; PDBTitle: structure of the immunoglobulin-superfamily ectodomain of2 human cd47
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30.........40... ......50.........60.........70..
Predicted Secondary structure 







....
















Query SS confidence 


















. . . .




























Query Sequence  RTLTIPCKSDPDLCMQLDA. . . . WDAETSIPALLNGEHSVLYRTRYDQQSDA
Query Conservation   





 

  






....


 




 
  
   


  



   
Alig confidence 


















....
........



















Template Conservation 


 


              
 
........      
             
Template Sequence  DTVVIPCFVTNMEAQNTTEVYVKW. . . . . . . . KFKGRDIYTFDGALNKSTVP
Template Known Secondary structure  S

BBTT


SSGGG........TTTTTT

Template Predicted Secondary structure 









........











Template SS confidence 



















































   17..20.........30.........40 .........50.........60
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions