Job Description P0A9P4 Confidence 99.93% Date Thu Jan 5 11:10:53 GMT 2012 Rank 74 Aligned Residues 280 % Identity 18% Template c3k30B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:histamine dehydrogenase; PDBTitle: histamine dehydrogenase from nocardiodes simplex Resolution 2.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.	80
Predicted Secondary structure																																																																													.
Query SS confidence																																																																													.
Query Sequence		G	T	T	K	H	S	K	L	L	I	L	G	S	G	P	A	G	Y	T	A	A	V	Y	A	A	R	A	N	L	Q	P	V	L	I	T	G	M	E	K	G	G	Q	L	T	T	T	T	E	V	E	N	W	P	G	D	P	N	D	L	T	G	P	L	L	M	E	R	M	H	E	H	A	T	K	F	.	E	T	E	I
Query Conservation																																																																													.
Alig confidence																																																			.	.	.	.	.																						.
Template Conservation																																																			.	.	.	.	.
Template Sequence		A	K	E	S	D	A	R	V	L	V	V	G	A	G	P	S	G	L	E	A	A	R	A	L	G	V	R	G	Y	D	V	V	L	A	E	A	G	R	D	L	G	G	R	V	T	Q	E	S	A	.	.	.	.	.	L	P	G	L	S	A	W	G	R	V	K	E	Y	R	E	A	V	L	A	E	L	P	N	V	E	I
Template Known Secondary structure				S	S										S														T								S	S	S	S	S		T							T	.	.	.	.	.	S	T	T		G	G	G	G												T		T	T
Template Predicted Secondary structure																																																			.	.	.	.	.
Template SS confidence
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.						.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130							.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.
Query Sequence		I	F	D	H	I	N	K	V	D	L	Q	N	R	P	F	R	L	N	G	D	N	G	E	Y	T	C	D	A	L	I	I	A	T	G	A	S	A	R	Y	L	G	L	P	S	E	E	A	F	K	G	.	.	.	.	.	.	R	G	V	S	A	C	A	T	C	D	G	F	F	Y	R	N	Q	K	V	A	V	I	G	G
Query Conservation																																																				.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	R	E	S	P	M	T	G	D	D	I	.	.	.	.	.	.	.	.	.	.	V	E	F	G	F	E	H	V	I	T	A	T	G	A	T	W	R	T	D	G	V	A	R	F	H	T	T	A	L	P	I	A	E	G	M	Q	V	L	G	P	D	D	L	F	A	G	R	L	P	D	G	K	K	V	V	V	Y	D	D
Template Known Secondary structure			S	S									.	.	.	.	.	.	.	.	.	.			T	T														S	S			S	S	S		S	S				B		T	T	S											T				S	S	S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.
Template SS confidence
		462	.	.	.	.	.	.	.	470	.	.											.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.
				155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.				.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.																													.	.	.
Query SS confidence		.	.																													.	.	.
Query Sequence		.	.	G	N	T	A	V	E	E	A	L	Y	L	S	N	I	A	S	E	V	H	L	I	H	R	R	D	G	F	R	.	.	.	A	E	K	I	L	I	K	R	L	M	D	K	V	E	N	G	N	I	I	L	H	T	N	R	T	L	E	E	V	T	G	D	Q	M	G	V	T	G	V	R	L	R	D	T	Q	N	S
Query Conservation		.	.																													.	.	.
Alig confidence		.	.																													.	.	.																																						.	.	.	.	.	.
Template Conservation																																																																								.	.	.	.	.	.
Template Sequence		D	H	Y	Y	L	G	G	V	V	A	E	L	L	A	Q	K	G	Y	E	V	S	I	V	T	P	G	A	Q	V	S	S	W	T	N	N	T	F	E	V	N	R	I	Q	R	R	L	I	E	N	G	V	A	R	V	T	D	H	A	V	V	A	V	G	A	G	G	V	T	V	R	.	.	.	.	.	.	D	T	Y	A
Template Known Secondary structure		S		S	S												T	T								S	S	S	S	T	T	G	G	G	G	T	T	T												T	T						S								T	T						.	.	.	.	.	.		T	T	T
Template Predicted Secondary structure																																																																								.	.	.	.	.	.
Template SS confidence
		532	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.							.	.	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	N	I	E	S	L	D	V	A	G	L	F	V	A	I	G	H	S	P	N	T	A	I	F	E	G	Q	L	E	L	E	N	G	Y	I	K	V	Q	S	G	I	H	G	N	A	T	Q	T	S	I	P	G	V	F	A	A	G	D	V	M	D	H	I	Y	R	Q	A	I	T	S	A	G	T	G	C	M	A	A	L	D
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Sequence		S	I	E	R	E	L	E	C	D	A	V	V	M	V	T	A	R	L	P	R	E	E	L	Y	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	A	R	R	D	A	G	E	I	A	S	V	R	G	I	G	D	A	W	A	.	.	P	G	T	I	A	A	A	V	W	S	G	R	R	A	A	E	E
Template Known Secondary structure										S																		.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T	T	S		S						G	G	G	T	S	.	.
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template SS confidence
		606	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.															.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.			.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.
		310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	R	Y	L	D	G	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	D	A	V	L	P	S	N	D
Template Known Secondary structure		T	T						T	T
Template Predicted Secondary structure
Template SS confidence
		670	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions