Job Description P0A9P4 Confidence 99.23% Date Thu Jan 5 11:10:53 GMT 2012 Rank 183 Aligned Residues 287 % Identity 17% Template c3g5rA_ PDB info PDB header:transferase Chain: A: PDB Molecule:methylenetetrahydrofolate--trna-(uracil-5-)- PDBTitle: crystal structure of thermus thermophilus trmfo in complex with2 tetrahydrofolate Resolution 1.60 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40								.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																			.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.
Query Sequence		K	L	L	I	L	G	S	G	P	A	G	Y	T	A	A	V	Y	A	A	R	A	N	L	Q	P	V	L	I	T	G	M	E	K	.	.	.	.	.	.	.	G	G	Q	L	T	T	T	T	E	V	E	N	W	P	G	D	P	N	D	L	T	G	P	L	L	M	E	R	M	H	E	H	A	T	K	F	E	T	E	I
Query Conservation																																			.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	V	N	V	V	G	A	G	L	A	G	S	E	A	A	W	T	L	L	R	L	G	V	P	V	R	L	F	E	M	R	P	K	R	M	T	P	A	H	G	T	D	R	F	A	E	I	V	C	S	N	S	L	G	G	E	G	E	T	N	A	K	G	L	L	Q	A	E	M	R	R	A	G	S	L	V	M	E	A	A
Template Known Secondary structure		S							S													T	T									T	T	T	S			S	S			S	S		T	T				S								S	T	T													T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		I	F	D	H	I	N	K	V	D	L	Q	N	R	P	F	R	L	N	G	D	N	G	E	Y	T	C	D	A	L	I	I	A	T	G	A	S	A	R	Y	L	G	L	P	S	E	E	A	F	K	G	R	G	V	S	A	C	A	T	C	D	G	F	F	Y	R	N	Q	K	V	A	V	I	G	G	G	N	T	A	V	E
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.
Template Sequence		D	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	R	V	P	A	G	G	A	L	A	V	D	R	E	E	F	S	G	Y	I	T	E	R	L	T	G	H	P	L	L	E	V	V	R	E	E	V	.	.	.	.	.	.	.	.	.	R	E	I	P	P	G	I	T	V	L	A	T	G	P	L	T	S	E	A
Template Known Secondary structure				T	.	.	.	.	.	.	.	.	.	.	.	.	.					S	S																			T		T	T						S			.	.	.	.	.	.	.	.	.		S			S	S	S							T	T
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.
Template SS confidence
		83	.	.														.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.										.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		161	.	.	.	.	.	.		.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.																																						.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure									.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	A	L	Y	L	S	N	.	I	A	S	E	V	H	L	I	H	R	R	D	G	F	R	A	E	K	I	L	I	K	R	L	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	K	V	E	N	G	N	I	I	L
Query Conservation									.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	A	E	A	L	K	R	R	F	G	D	H	F	L	A	Y	Y	D	A	A	S	P	I	V	L	Y	E	S	I	D	L	T	K	C	F	R	A	G	R	Y	G	Q	S	A	D	Y	L	N	C	P	M	T	E	E	E	Y	R	R	F	H	Q	A	L	L	E	A	C	V	P	V	E	E	L	A	R	R	G	Y	Q	T
Template Known Secondary structure												G	G	G													G	G	G	S		G	G	G							T	T	S		T	T																																	T	T
Template Predicted Secondary structure
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		203	.	.	.	.	.	.	210	.	.				.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.											.	.		.
Predicted Secondary structure												.	.	.																																																						.	.	.	.	.	.	.	.	.	.			.
Query SS confidence												.	.	.																																																						.	.	.	.	.	.	.	.	.	.			.
Query Sequence		H	T	N	R	T	L	E	E	V	T	.	.	.	G	D	Q	M	G	V	T	G	V	R	L	R	D	T	Q	N	S	D	N	I	E	S	L	D	V	A	G	L	F	V	A	I	G	H	S	P	N	T	A	I	F	E	G	Q	L	E	L	E	N	G	Y	I	K	.	.	.	.	.	.	.	.	.	.	V	Q	.	S
Query Conservation												.	.	.																																																						.	.	.	.	.	.	.	.	.	.			.
Alig confidence												.	.	.																																																						.	.	.	.	.	.	.	.	.	.			.
Template Conservation
Template Sequence		L	L	F	G	P	M	K	P	V	G	L	V	D	P	R	T	G	K	E	P	F	A	V	V	Q	L	R	Q	E	D	K	A	G	R	M	W	S	L	V	G	F	Q	T	G	L	K	W	P	E	Q	K	R	L	I	Q	M	I	P	G	L	E	N	A	E	I	V	R	Y	G	V	M	H	R	N	T	Y	L	N	A	P
Template Known Secondary structure					T	T	T			T	T			B	T	T	T	T	B			S									S	T	T	S						T	T															T	T	S	T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
		269	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		G	I	H	G	N	A	T	Q	T	S	.	I	P	G	V	F	A	A	G	D	V	M	D	H	I	Y	R	Q	A	I	T	S	A	G	T	G	C	M	A	A	L	D	A	E	R	Y	L	D	G	L	A
Query Conservation												.
Alig confidence												.																.	.
Template Conservation																												.	.
Template Sequence		R	L	L	G	E	T	L	E	F	R	E	A	E	G	L	Y	A	A	G	V	L	A	G	V	E	G	.	.	Y	L	E	S	A	A	T	G	F	L	A	G	L	N	A	A	R	K	A	L	G	L	P
Template Known Secondary structure				B		T	T	S	B	B	T	T	S	T	T					G	G	G	G	T	B		S	.	.																					T
Template Predicted Secondary structure																												.	.
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.			.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions