Job Description P0A9P4 Confidence 99.98% Date Thu Jan 5 11:10:53 GMT 2012 Rank 13 Aligned Residues 293 % Identity 35% Template c3f8rD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:thioredoxin reductase (trxb-3); PDBTitle: crystal structure of sulfolobus solfataricus thioredoxin2 reductase b3 in complex with two nadp molecules Resolution 1.95 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	H	S	K	L	L	I	L	G	S	G	P	A	G	Y	T	A	A	V	Y	A	A	R	A	N	L	Q	P	V	L	I	T	G	M	E	K	G	G	Q	L	T	T	T	T	E	V	E	N	W	P	G	D	P	N	D	L	T	G	P	L	L	M	E	R	M	H	E	H	A	T	K	F	E	T	E	I	I	F	D	H
Query Conservation
Alig confidence																																				.
Template Conservation																																				.
Template Sequence		E	K	F	D	V	I	I	V	G	L	G	P	A	A	Y	G	A	A	L	Y	S	A	R	Y	M	L	K	T	L	V	I	G	E	T	.	P	G	G	Q	L	T	E	A	G	I	V	D	D	Y	L	G	L	I	E	I	Q	A	S	D	M	I	K	V	F	N	K	H	I	E	K	Y	E	V	P	V	L	L	D	I	V
Template Known Secondary structure												S													T	T								S	S	.	T	T	G	G	G	G	G							S	T	T	S	T	T																T	T	T						S
Template Predicted Secondary structure																																				.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	N	K	V	D	L	Q	N	R	P	F	R	L	N	G	D	N	G	E	Y	T	C	D	A	L	I	I	A	T	G	A	S	A	R	Y	L	G	L	P	S	E	E	A	F	K	G	R	G	V	S	A	C	A	T	C	D	G	F	F	Y	R	N	Q	K	V	A	V	I	G	G	G	N	T	A	V	E	E	A	L	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	K	I	E	N	R	G	D	E	F	V	V	K	T	K	R	K	G	E	F	K	A	D	S	V	I	L	G	I	G	V	K	R	R	K	L	G	V	P	G	E	Q	E	F	A	G	R	G	I	S	Y	C	S	V	C	D	A	P	L	F	K	N	R	V	V	A	V	I	G	G	G	D	S	A	L	E	G	A	E	I
Template Known Secondary structure								S	S	S						S	S	S																						T	T	T	T	T	T	B	T	T	T			S						G	G	G	G	T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	N	I	A	S	E	V	H	L	I	H	R	R	D	G	F	R	A	E	K	I	L	I	K	R	L	M	D	K	V	E	N	G	N	I	I	L	H	T	N	R	T	L	E	E	V	T	G	D	Q	M	G	V	T	G	V	R	L	R	D	T	Q	N	S	D	N	I	E	S	L	D	V	A	G	L	F	V	A	I
Query Conservation
Alig confidence																							.	.	.																																			.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.																																			.	.	.	.	.	.	.	.	.	.
Template Sequence		L	S	S	Y	S	T	K	V	Y	L	I	H	R	R	D	T	F	K	A	Q	P	.	.	.	I	Y	V	E	T	V	K	K	K	P	N	V	E	F	V	L	N	S	V	V	K	E	I	K	G	D	K	V	V	K	Q	V	V	V	.	.	.	.	.	.	.	.	.	.	E	N	L	K	V	N	G	V	F	I	E	I
Template Known Secondary structure			T	T	T		S							S	S	S	S			S			.	.	.								T		T	T						S									S	S	S							.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																							.	.	.																																			.	.	.	.	.	.	.	.	.	.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.				.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.											.	.	230	.	.	.	.	.	.	.	.	.
		245	.	.	.	.	250	.	.	.	.	.			.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.			.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure													.	.																																						.	.
Query SS confidence													.	.																																						.	.
Query Sequence		G	H	S	P	N	T	A	I	F	E	G	.	.	Q	L	E	L	E	N	G	Y	I	K	V	Q	S	G	I	H	G	N	A	T	Q	T	S	I	P	G	V	F	A	A	G	D	V	M	D	H	I	.	.	Y	R	Q	A	I	T	S	A	G	T	G	C	M	A	A	L	D	A	E	R	Y	L	D	G
Query Conservation													.	.																																						.	.
Alig confidence													.	.													.	.	.	.	.																					.	.
Template Conservation																											.	.	.	.	.
Template Sequence		G	F	D	P	P	T	D	F	A	K	S	N	G	I	E	T	D	T	N	G	Y	I	K	V	D	.	.	.	.	.	E	W	M	R	T	S	V	P	G	V	F	A	A	G	D	C	T	S	A	W	L	G	F	R	Q	V	I	T	A	V	A	Q	G	A	V	A	A	T	S	A	Y	R	Y	V	T	E
Template Known Secondary structure													T	T			B		T	T	S	S	B				.	.	.	.	.	T	T		B		S	S	T	T					S	T	T	B	S	T	T	T	T
Template Predicted Secondary structure																											.	.	.	.	.
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.						.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions