Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9P4
Confidence99.28%DateThu Jan 5 11:10:53 GMT 2012
Rank176Aligned Residues175
% Identity17%Templatec3da1A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:glycerol-3-phosphate dehydrogenase; PDBTitle: x-ray structure of the glycerol-3-phosphate dehydrogenase2 from bacillus halodurans complexed with fad. northeast3 structural genomics consortium target bhr167.
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  TTKHSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIF
Query Conservation       







 


 

  

  
  
 


     
                                        
Alig confidence 








































...



































Template Conservation       








 
   
  

  

 
 


  
   
...

  









 
      
  
          
Template Sequence  SEKQLDLLVIGGGITGAGIALDAQVRGIQTGLVEXNDFASG. . . TSSRSTKLVHGVGKERAIVYENAPHVTTPEWXLLPI
Template Known Secondary structure  TTS


STTT

SSSTT
S...GGGSS





TTT
Template Predicted Secondary structure 


















...









Template SS confidence 















































































   15....20.........30.........40.........50..... ....60.........70.........80.........90.
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
Predicted Secondary structure 








































Query SS confidence 















































































Query Sequence  DHINKVDLQNRPFRLNGDNGEYTCDALIIATGASARYLGLPSEEAFKGRGVSACATCDGFFYRNQKVAVIGGGNTAVEEA
Query Conservation                                                                                 
Alig confidence 



..................................................................









Template Conservation      .................................................................. 
        
Template Sequence  FKRY. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . XLNEKQTLEK
Template Known Secondary structure 


..................................................................
Template Predicted Secondary structure 

..................................................................

Template SS confidence 















































































   107..110 .........120
 
   163......170.........180.........190.........200.........210.........220.........230.........240..
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  LYLSNIASEVHLIHRRDGFRAEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFV
Query Conservation                                  
   

       
  
                               
Alig confidence 






























































.















Template Conservation   
 
               
    
   
   
   
        
         
 

   
.        
 
  


Template Sequence  EPLLRKENLKGGGIYVEYRTDDARLTLEIXKEAVARGAVALNYXKVESFIYDQGKVVGVVAKD. RLTDTTHTIYAKKVVN
Template Known Secondary structure 
TTS

TT



TT
STT.TTT

Template Predicted Secondary structure 


















.





Template SS confidence 















































































   148.150.........160.........170.........180.........190.........200.........210 .........220......
 
   243....
Predicted Secondary structure 



Query SS confidence 




Query Sequence  AIGHS
Query Conservation       
Alig confidence 




Template Conservation 


  
Template Sequence  AAGPW
Template Known Secondary structure 

GGG
Template Predicted Secondary structure 


Template SS confidence 




   227..230.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions