Job Description P0A9P4 Confidence 99.96% Date Thu Jan 5 11:10:53 GMT 2012 Rank 42 Aligned Residues 301 % Identity 18% Template c1zmcG_ PDB info PDB header:oxidoreductase Chain: G: PDB Molecule:dihydrolipoyl dehydrogenase; PDBTitle: crystal structure of human dihydrolipoamide dehydrogenase2 complexed to nad+ Resolution 2.53 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.																																	.	.	.	.	.	.	50
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	T	K	H	S	K	L	L	I	L	G	S	G	P	A	G	Y	T	A	A	V	Y	A	A	R	A	N	L	Q	P	V	L	I	T	G	M	E	K	G	G	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	T	T	T	T	E	V
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	P	I	D	A	D	V	T	V	I	G	S	G	P	G	G	Y	V	A	A	I	K	A	A	Q	L	G	F	K	T	V	C	I	E	K	N	E	T	L	G	G	T	C	L	N	V	G	C	I	P	S	K	A	L	L	N	N	S	H	Y	Y	H	M	A	H	G	T	D	F	A	S	R	G	I	E	M	S	E	V	R
Template Known Secondary structure														S														T									S	S	S	S	S							S																			S					T	T	T				S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	W	P	G	D	P	N	D	L	T	G	P	L	L	M	E	R	M	H	E	H	A	T	K	F	E	T	E	I	I	F	D	H	I	N	K	V	D	L	Q	N	R	P	F	R	L	N	G	D	N	G	E	Y	T	C	D	A	L	I	I	A	T	G	A	S	A	R	Y	L	G	L	P	S	E	E	A	F	K	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	N	L	D	K	M	M	E	Q	K	S	T	A	V	K	A	L	T	G	G	I	A	H	L	F	K	Q	N	K	V	V	H	V	N	G	Y	G	K	I	T	G	K	N	Q	V	T	A	T	K	A	D	G	G	T	Q	V	I	D	T	K	N	I	L	I	A	T	G	S	E	V	T	P	F	P	G	I	T	I	D	E
Template Known Secondary structure																													T	T						S							T	T							T	T	S																						T	T					S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.				.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.
Query SS confidence																																																							.	.	.
Query Sequence		R	G	V	S	A	C	A	T	C	D	G	F	F	Y	R	N	Q	K	V	A	V	I	G	G	G	N	T	A	V	E	E	A	L	Y	L	S	N	I	A	S	E	V	H	L	I	H	R	R	D	G	F	R	A	.	.	.	E	K	I	L	I	K	R	L	M	D	K	V	E	N	G	N	I	I	L	H	T	N	R	T
Query Conservation																																																							.	.	.
Alig confidence																																																							.	.	.
Template Conservation
Template Sequence		D	T	I	V	S	S	T	G	A	L	S	L	K	K	V	P	E	K	M	V	V	I	G	A	G	V	I	G	V	E	L	G	S	V	W	Q	R	L	G	A	D	V	T	A	V	E	F	L	G	H	V	G	G	V	G	I	D	M	E	I	S	K	N	F	Q	R	I	L	Q	K	Q	G	F	K	F	K	L	N	T	K
Template Known Secondary structure		S	S								T	T		S	S			S								S													T	T								S	S	S	S	S	S		T	T																	T						S
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.				.	.	.	.	.	.	260		.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure																																																.	.	.								.
Query SS confidence																																																.	.	.								.
Query Sequence		L	E	E	V	T	G	D	Q	M	G	V	T	G	V	R	L	R	D	T	Q	N	S	D	N	I	E	S	L	D	V	A	G	L	F	V	A	I	G	H	S	P	N	T	A	I	F	.	.	.	E	G	Q	L	E	L	E	.	N	G	Y	I	K	V	Q	S	G	I	H	G	N	A	T	Q	T	S	I	P	G	V	F
Query Conservation																																																.	.	.								.
Alig confidence																						.																										.	.	.								.								.	.	.	.	.
Template Conservation																						.																																												.	.	.	.	.
Template Sequence		V	T	G	A	T	K	K	S	D	G	K	I	D	V	S	I	E	A	A	S	.	G	G	K	A	E	V	I	T	C	D	V	L	L	V	C	I	G	R	R	P	F	T	K	N	L	G	L	E	E	L	G	I	E	L	D	P	R	G	R	I	P	V	N	.	.	.	.	.	T	R	F	Q	T	K	I	P	N	I	Y
Template Known Secondary structure									T	T	S									T	T	.	S									S													T	T	S	S					T					T	T	S						.	.	.	.	.	T	T		B		S	S	T	T
Template Predicted Secondary structure																						.																																												.	.	.	.	.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.		.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.						.	.	.	.	310	.	.	.	.	.	.
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	G	D	V	M	D	H	I	Y	R	Q	A	I	T	S	A	G	T	G	C	M	A	A	L	D	A
Query Conservation
Alig confidence												.
Template Conservation												.
Template Sequence		A	I	G	D	V	V	A	G	P	M	.	L	A	H	K	A	E	D	E	G	I	I	C	V	E	G	M
Template Known Secondary structure				G	G	G	S	S	S			.
Template Predicted Secondary structure												.
Template SS confidence
		317	.	.	320	.	.	.	.	.	.		.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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