Job Description P0A9P4 Confidence 99.89% Date Thu Jan 5 11:10:53 GMT 2012 Rank 80 Aligned Residues 267 % Identity 18% Template c1y56A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:hypothetical protein ph1363; PDBTitle: crystal structure of l-proline dehydrogenase from p.horikoshii Resolution 2.86 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	L	L	I	L	G	S	G	P	A	G	Y	T	A	A	V	Y	A	A	R	A	N	L	Q	P	V	L	I	T	G	M	E	K	G	G	Q	L	T	T	T	T	E	V	E	N	W	P	G	D	P	N	D	L	T	G	P	L	L	M	E	R	M	H	E	H	A	T	K	F	E	T	E	I	I	F	D	H	I	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	D	V	A	I	I	G	G	G	P	A	G	I	G	A	A	L	E	L	Q	Q	Y	L	T	V	A	L	I	E	E	R	G	W	L	G	G	D	M	W	L	K	G	I	K	Q	E	G	F	N	K	D	S	R	K	V	V	E	E	L	V	G	K	L	N	E	N	T	K	I	Y	L	E	T	S	A	L	G	V	F	D
Template Known Secondary structure			S							S											T	T	T								T	T	S	S	S	S		S	G	G	G	T		S			T	T	T	T													T			T	T					T	T
Template Predicted Secondary structure
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.			.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																																										.	.
Query SS confidence																																										.	.
Query Sequence		K	V	D	L	Q	N	R	P	F	R	L	N	G	D	N	G	E	Y	T	C	D	A	L	I	I	A	T	G	A	S	A	R	Y	L	G	L	P	S	E	E	.	.	A	F	K	G	R	G	V	S	A	C	A	T	C	D	G	F	F	Y	R	N	Q	K	V	A	V	I	G	G	G	N	T	A	V	E	E	A	L	Y
Query Conservation																																										.	.
Alig confidence																																										.	.																															.	.	.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.	.	.
Template Sequence		K	G	E	Y	F	L	V	P	V	V	R	G	D	K	L	I	E	I	L	A	K	R	V	V	L	A	T	G	A	I	D	S	T	M	L	F	E	N	N	D	M	P	G	V	F	R	R	D	F	A	L	E	V	M	N	V	W	E	V	A	P	G	R	K	V	A	V	T	G	S	K	A	.	.	.	.	.	.	.	.
Template Known Secondary structure			S	S	S								T	T								S																T	T	T	T	S	T	T													T	S		B		S		S						S	T	T		.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	N	I	A	S	E	V	H	L	I	H	R	R	D	G	F	R	A	E	K	I	L	I	K	R	L	M	D	K	V	E	N	G	N	I	I	L	H	T	N	R	T	L	E	E	V	T	G	D	Q	M	G	V	T	G	V	R	L	R	D	T	Q	N	S	D	N	I	E	S	L	D	V	A	G	L	F	V	A	I
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	V	I	Q	E	L	E	R	W	G	I	D	Y	V	H	I	P	N	V	K	R	V	E	G	N	E	K	V	E	R	V	I	D	.	.	.	.	.	.	.	M	N	N	H	E	Y	K	V	D	A	L	I	F	A	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T							S	S							S	S	S							.	.	.	.	.	.	.	T	T							S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.
Template SS confidence
																										259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.								.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		245	.	.	.	.	250	.	.	.	.	.		.	.	.	.				260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.					.	.	.
Query SS confidence													.					.	.	.
Query Sequence		G	H	S	P	N	T	A	I	F	E	G	.	Q	L	E	L	.	.	.	E	N	G	Y	I	K	V	Q	S	G	I	H	G	N	A	T	Q	T	S	I	P	G	V	F	A	A	G	D	V	M	D	H	I	Y	R	Q	A	I	T	S	A	G	T	G	C	M	A	A	L	D	A	E	R	Y	L	D	G	L	A	D
Query Conservation													.					.	.	.
Alig confidence													.					.	.	.									.	.	.	.	.																						.	.
Template Conservation																													.	.	.	.	.																						.	.
Template Sequence		G	R	R	P	D	I	N	P	I	T	Q	A	G	G	K	L	R	F	R	R	G	Y	Y	S	P	V	L	.	.	.	.	.	D	E	Y	H	R	I	K	D	G	I	Y	V	A	G	S	A	V	S	I	K	P	.	.	H	Y	A	N	Y	L	E	G	K	L	V	G	A	Y	I	L	K	E	F	G	Y	D	A	Q
Template Known Secondary structure													T	T							T	T							.	.	.	.	.		T	T	S				T	T					S	T	T	T					.	.																			T	T
Template Predicted Secondary structure																													.	.	.	.	.																						.	.
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.						.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.			.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions