Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9P4
Confidence99.72%DateThu Jan 5 11:10:53 GMT 2012
Rank114Aligned Residues288
% Identity16%Templatec1vqwB_
PDB info PDB header:structural genomics, unknown functionChain: B: PDB Molecule:protein with similarity to flavin-containing PDBTitle: crystal structure of a protein with similarity to flavin-2 containing monooxygenases and to mammalian dimethylalanine3 monooxygenases
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20........ .30.........40.........
Predicted Secondary structure 







..










.............................
Query SS confidence 



























. .




















. . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  MGTTKHSKLLILGSGPAGYTAAVYAARA. . NLQPVLITGMEKGGQLTTTTE. . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation 
      







 


 

  

  ..
  
 


     
       .............................
Alig confidence 




..




















..




















.............................
Template Conservation   
  
.. 










 

  
     
  
 


     

 
                                 
Template Sequence  LPTIR. . KIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVY
Template Known Secondary structure 

S

..

STTS

S
SSSSSSGGGS

S


S


SSB

TT




B

SSS

B
Template Predicted Secondary structure 




..












































Template SS confidence 















































































   3.... ..10.........20.........30.........40.........50.........60.........70.........80
 
   50.........60.........70.........80.........90.........100..
Predicted Secondary structure  .....................





















......
Query SS confidence  . . . . . . . . . . . . . . . . . . . . .




















































. . . . . .
Query Sequence  . . . . . . . . . . . . . . . . . . . . . VENWPGDPNDLTGPLLMERMHEHATKFETEIIFDHINKVDLQNRPFRLNGDNG. . . . . .
Query Conservation  .....................                                                     ......
Alig confidence  .....................




















































......
Template Conservation   
  
  
  
       
 
 
       
     
  

   
      
   
 
  
        
          
Template Sequence  PSPLYRDLQTNTPIELXGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYKGTKAGSP
Template Known Secondary structure 




TT
B
SS
TTTSS
TTS


TT

SS
BGGGGGG
STTSSTT

Template Predicted Secondary structure 









































Template SS confidence 















































































   81........90.........100.........110.........120.........130.........140.........150.........160
 
   103......110.... .....120......... 130.........140.........150.........160.........170....
Predicted Secondary structure  ..

..














....




















Query SS confidence  . .











. .














. . . .












































Query Sequence  . . EYTCDALIIATG. . ASARYLGLPSEEAFK. . . . GRGVSACATCDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHL
Query Conservation  ..            ..               ....                                
            
Alig confidence  ..











..














....












































Template Conservation        
 





    
 

 



        
 
 

  
        
 




 
 

 


  
   
  
  
Template Sequence  ISKDIFDAVSICNGHYEVPYIPNIKGLDEYAKAVPGSVLHSSLFREPELFVGESVLVVGGASSANDLVRHLTPVAKHPIY
Template Known Secondary structure  S


SSSSB
B


BTSTTSGGG


GGGGTT



STTTS
SS
Template Predicted Secondary structure 





























Template SS confidence 















































































   161........170.........180.........190.........200.........210.........220.........230.........240
 
   175....180.........190.........200.........210.........220.........230...... ...240.........250...
Predicted Secondary structure 
























.







Query SS confidence 





























































.
















Query Sequence  IHRRDGFRAEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLD. VAGLFVAIGHSPNTAIF
Query Conservation                      
   

       
  
                         .                 
Alig confidence 











.......................


























.
















Template Conservation    
         .......................                 
   

     

 

 



    


Template Sequence  QSLLGGGDIQNE. . . . . . . . . . . . . . . . . . . . . . . SLQQVPEITKFDPTTREIYLKGGKVLSNIDRVIYCTGYLYSVPFP
Template Known Secondary structure  TT

S
B
S.......................S
TTTTTTS


S


B





Template Predicted Secondary structure 








.......................




























Template SS confidence 















































































   241........250.. .......260.........270.........280.........290.......
 
   254.....260.........270..... ....280.........290.........300.........310.........
Predicted Secondary structure 













.....



















Query SS confidence 





















. . . . .











































Query Sequence  EGQLELENGYIKVQSGIHGNAT. . . . . QTSIPGVFAAGDVMDHIYRQAITSAGTGCMAALDAERYLDGLAD
Query Conservation          
 
 
         ..... 
    


 

 
         
   
  

  
   
     
Alig confidence 





















.....

















......



















Template Conservation                       

  

    
 
 


       ......    
 

   
    
   
Template Sequence  SLAKLKSPETKLIDDGSHVHNVYQHIFYIPDPTLAFVGLALHVVP. . . . . . FPTSQAQAAFLARVWSGRLK
Template Known Secondary structure  S

STTT


SSSS


STTTTT
TT
S

BSS
......TTSS
Template Predicted Secondary structure 






































......




Template SS confidence 






































































   298.300.........310.........320.........330.........340.. .......350.........360..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions