Phyre 2 alignment of P0A9P4 with c1q1wA

Job Description P0A9P4
Confidence 99.96% Date Thu Jan 5 11:10:53 GMT 2012

Rank 44 Aligned Residues 293

% Identity 16% Template c1q1wA_

PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putidaredoxin reductase; PDBTitle: crystal structure of putidaredoxin reductase from2 pseudomonas putida

Resolution 2.60 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.			.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																											.	.
Query SS confidence																											.	.
Query Sequence	H	S	K	L	L	I	L	G	S	G	P	A	G	Y	T	A	A	V	Y	A	A	R	A	N	L	Q	.	.	P	V	L	I	T	G	M	E	K	G	G	Q	L	T	T	T	T	E	V	E	N	W	P	G	D	P	N	D	L	T	G	P	L	L	M	E	R	M	H	E	H	A	T	K	F	E	T	E	I	I	F	D
Query Conservation																											.	.
Alig confidence																											.	.													.	.	.
Template Conservation																																									.	.	.
Template Sequence	N	D	N	V	V	I	V	G	T	G	L	A	G	V	E	V	A	F	G	L	R	A	S	G	W	E	G	N	I	R	L	V	G	D	A	T	V	I	P	H	.	.	.	H	L	P	P	L	S	K	A	Y	L	A	G	K	A	T	A	E	S	L	Y	L	R	T	P	D	A	Y	A	A	Q	N	I	Q	L	L	G	G
Template Known Secondary structure	S									S													T	T			S							S			S			B	.	.	.		S	G	G	G	G	T	T	T	T	T	T		S		S	G	G	G	B	S	S								T	T						S
Template Predicted Secondary structure																																									.	.	.
Template SS confidence
	4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.				.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80

	84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.							.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.
Query Sequence	H	I	N	K	V	D	L	Q	N	R	P	F	R	L	N	G	D	N	G	E	Y	T	C	D	A	L	I	I	A	T	G	A	S	A	R	Y	L	G	L	P	S	E	E	A	F	K	G	R	G	V	S	A	.	.	.	.	.	.	C	A	T	C	D	G	F	F	Y	R	N	Q	K	V	A	V	I	G	G	G	N	T
Query Conservation																																																					.	.	.	.	.	.
Alig confidence																																																					.	.	.	.	.	.
Template Conservation
Template Sequence	T	Q	V	T	A	I	N	R	D	R	Q	Q	V	I	L	S	D	G	R	A	L	D	Y	D	R	L	V	L	A	T	G	G	R	P	R	P	L	P	V	A	S	G	A	V	G	K	A	N	N	F	R	Y	L	R	T	L	E	D	A	E	C	I	R	R	Q	L	I	A	D	N	R	L	V	V	I	G	G	G	Y	I
Template Known Secondary structure								T	T	T	T					T	T	S						S														G	G	G	T	T					S	T	T				S	S	S									T	T			T	T									S
Template Predicted Secondary structure
Template SS confidence
	81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160

	158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.				.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																										.	.	.
Query SS confidence																										.	.	.
Query Sequence	A	V	E	E	A	L	Y	L	S	N	I	A	S	E	V	H	L	I	H	R	R	D	G	F	R	.	.	.	A	E	K	I	L	I	K	R	L	M	D	K	V	E	N	G	N	I	I	L	H	T	N	R	T	L	E	E	V	T	G	D	Q	M	G	V	T	G	V	R	L	R	D	T	Q	N	S	D	N	I	E	S
Query Conservation																										.	.	.
Alig confidence																										.	.	.																																													.	.	.	.
Template Conservation																																																																									.	.	.	.
Template Sequence	G	L	E	V	A	A	T	A	I	K	A	N	M	H	V	T	L	L	D	T	A	A	R	V	L	E	R	V	T	A	P	P	V	S	A	F	Y	E	H	L	H	R	E	A	G	V	D	I	R	T	G	T	Q	V	C	G	F	E	M	S	T	D	Q	Q	K	V	T	A	V	L	C	E	.	.	.	.	D	G	T	R
Template Known Secondary structure											T	T								S	S	S	S	T	T	T	T	T	S																T						S										T	T	T									T	.	.	.	.	T	S
Template Predicted Secondary structure																																																																									.	.	.	.
Template SS confidence
	161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.					.	.	.	.

	235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.										.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.	.	.
Query Sequence	L	D	V	A	G	L	F	V	A	I	G	H	S	P	N	T	A	I	F	E	G	Q	L	E	L	E	N	G	Y	I	K	V	Q	S	G	I	H	G	N	A	T	Q	T	S	I	P	G	V	F	A	A	G	D	V	M	D	H	I	.	.	.	.	.	.	.	.	.	Y	R	Q	A	I	T	S	A	G	T	G	C	M
Query Conservation																																																											.	.	.	.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.																					.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.
Template Sequence	L	P	A	D	L	V	I	A	G	I	G	L	I	P	N	C	E	L	A	S	A	A	G	L	Q	V	D	N	G	I	V	I	N	.	.	.	.	.	E	H	M	Q	T	S	D	P	L	I	M	A	V	G	D	C	A	R	F	H	S	Q	L	Y	D	R	W	V	R	I	E	S	V	P	N	A	L	E	Q	A	R	K
Template Known Secondary structure				S																	T	T	T			B	S	S	S					.	.	.	.	.	T	T	S	B		S	S	T	T					G	G	G						T	T	T	T							S
Template Predicted Secondary structure																																		.	.	.	.	.
Template SS confidence
	237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.						270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.

	306	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence	A	A	L	D	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence	I	A	A	I	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
	312	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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