Phyre 2 alignment of P0A9P4 with c1phhA

Job Description P0A9P4
Confidence 99.35% Date Thu Jan 5 11:10:53 GMT 2012

Rank 162 Aligned Residues 268

% Identity 12% Template c1phhA_

PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:p-hydroxybenzoate hydroxylase; PDBTitle: crystal structure of p-hydroxybenzoate hydroxylase complexed with its2 reaction product 3,4-dihydroxybenzoate

Resolution 2.30 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40																																													.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	H	S	K	L	L	I	L	G	S	G	P	A	G	Y	T	A	A	V	Y	A	A	R	A	N	L	Q	P	V	L	I	T	G	M	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	K	T	Q	V	A	I	I	G	A	G	P	S	G	L	L	L	G	Q	L	L	H	K	A	G	I	D	N	V	I	L	E	R	Q	T	P	D	Y	V	L	G	R	I	R	A	G	V	L	E	Q	G	M	V	D	L	L	R	E	A	G	V	D	R	R	M	A	R	D	G	L	V	H	E	G	V	E	I	A	F	A	G
Template Known Secondary structure	B		S							S														T								S	S		T	T													T	T	S						T	S	S		S											S							S	S
Template Predicted Secondary structure
Template SS confidence
	2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.

	42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.							.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.
Query Sequence	G	Q	L	T	T	T	T	E	V	E	N	W	P	G	D	P	N	D	L	T	G	P	L	L	M	E	R	M	H	E	H	A	T	K	F	E	T	E	I	I	F	D	H	I	N	K	V	D	L	Q	N	.	.	.	.	.	.	R	P	F	R	L	N	G	D	N	G	E	Y	T	C	D	A	L	I	I	A	T	G	A
Query Conservation																																																				.	.	.	.	.	.
Alig confidence																																																				.	.	.	.	.	.
Template Conservation
Template Sequence	Q	R	R	R	I	D	L	K	R	L	S	G	G	K	T	V	T	V	Y	G	Q	T	E	V	T	R	D	L	M	E	A	R	E	A	C	G	A	T	T	V	Y	Q	A	A	E	V	R	L	H	D	L	Q	G	E	R	P	Y	V	T	F	E	R	D	G	E	R	L	R	L	D	C	D	Y	I	A	G	C	D	G	F
Template Known Secondary structure											T	T	S																					T	T	T						S									S	S	S	S	S							S	S	S								S								T
Template Predicted Secondary structure
Template SS confidence
	82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.

	116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	S	A	R	Y	L	G	L	P	S	E	E	A	F	K	G	R	G	V	S	A	C	A	T	C	D	G	F	F	Y	R	N	Q	K	V	A	V	I	G	G	G	N	T	A	V	E	E	A	L	Y	L	S	N	I	A	S	E	V	H	L	I	H	R	R	D	G	F	R	A	E	K	I	L	I	K	R	L	M	D	K	V
Query Conservation
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	H	G	I	S	R	Q	S	I	P	A	E	R	L	K	V	F	E	R	V	Y	P	F	G	W	L	G	L	L	A	D	T	P	P	V	S	H	E	L	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure	T		S	T	G	G	G	S		G	G	G									S										S	S				S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200

	196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	E	N	G	N	I	I	L	H	T	N	R	T	L	E	E	V	T	G	D	Q	M	G	V	T	G	V	R	L	R	D	T	Q	N	S	D	N	I	E	S	L	D	V	A	G	L	F	V	A	I	G	H	S	P	N	T	A	I	F	E	G	Q	L	E	L	E	N	G	Y	I	K	V	Q	S	G	I	H	G	N	A	T
Query Conservation
Alig confidence	.	.	.	.	.	.
Template Conservation	.	.	.	.	.	.
Template Sequence	.	.	.	.	.	.	Y	A	N	H	P	R	G	F	A	L	C	S	Q	R	S	A	T	R	S	R	Y	Y	V	Q	V	P	L	T	E	K	V	E	D	W	S	D	E	R	F	W	T	E	L	K	A	R	L	P	A	E	V	A	E	K	L	V	T	G	P	S	L	E	K	S	I	A	P	L	R	S	F	V	V	E
Template Known Secondary structure	.	.	.	.	.	.					T	T										T	T										S	S			G	G	G			S									T	T		S	S	S	S	S	S	S								S	B
Template Predicted Secondary structure	.	.	.	.	.	.
Template SS confidence
							201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.

	276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.					.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure																					.	.	.	.
Query SS confidence																					.	.	.	.
Query Sequence	Q	T	S	I	P	G	V	F	A	A	G	D	V	M	D	H	I	Y	R	Q	.	.	.	.	A	I	T	S	A	G	T	G	C	M	A	A	L	D	A	E	R	Y	L	D	G	L	A	D	A
Query Conservation																					.	.	.	.
Alig confidence																					.	.	.	.
Template Conservation
Template Sequence	P	M	Q	H	G	R	L	F	L	A	G	D	A	A	H	I	V	P	P	T	G	A	K	G	L	N	L	A	A	S	D	V	S	T	L	Y	R	L	L	L	K	A	Y	R	E	G	R	G	E
Template Known Secondary structure					T	T					G	G	G	T					G	G	G	S		S																				T	T	S			G
Template Predicted Secondary structure
Template SS confidence
	275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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