Job Description P0A9P4 Confidence 99.90% Date Thu Jan 5 11:10:53 GMT 2012 Rank 79 Aligned Residues 305 % Identity 17% Template c1lqtB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:fpra; PDBTitle: a covalent modification of nadp+ revealed by the atomic resolution2 structure of fpra, a mycobacterium tuberculosis oxidoreductase Resolution 1.05 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.								.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.
Query Sequence		K	H	S	K	L	L	I	L	G	S	G	P	A	G	Y	T	A	A	V	Y	A	A	R	A	.	.	.	.	.	.	.	N	L	Q	P	V	L	I	T	G	M	E	K	G	G	Q	L	T	T	T	T	E	V	E	N	W	P	G	D	P	N	D	L	T	G	P	L	L	M	E	R	M	H	E	H	A	T	K	F	E
Query Conservation																										.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.																													.	.	.	.	.	.
Template Conservation																																																													.	.	.	.	.	.
Template Sequence		R	P	Y	Y	I	A	I	V	G	S	G	P	S	A	F	F	A	A	A	S	L	L	K	A	A	D	T	T	E	D	L	D	M	A	V	D	M	L	E	M	L	P	T	P	W	G	L	V	R	S	G	V	A	P	D	H	P	K	I	.	.	.	.	.	.	K	S	I	S	K	Q	F	E	K	T	A	E	D	P	R
Template Known Secondary structure												S																	S	T	T										S	S	S	S		S	T					T	S		T	T		T	T	G	.	.	.	.	.	.	G	G	G									T	S	T	T
Template Predicted Secondary structure																																																													.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60							.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.				.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																																							.	.	.
Query SS confidence																																							.	.	.
Query Sequence		T	E	I	I	F	D	H	I	N	K	V	D	L	Q	N	R	P	F	R	L	N	G	D	N	G	E	Y	T	C	D	A	L	I	I	A	T	G	.	.	.	A	S	A	R	Y	L	G	L	P	S	E	E	A	F	K	G	R	G	V	S	A	C	A	T	C	D	G	F	F	Y	R	N	Q	K	V	A	V	I	G	G
Query Conservation																																							.	.	.
Alig confidence																																							.	.	.
Template Conservation
Template Sequence		F	R	F	F	G	N	V	V	V	G	E	H	V	Q	P	G	E	L	S	E	R	Y	D	A	V	I	Y	A	V	G	A	Q	S	D	R	M	L	N	I	P	G	E	D	L	P	G	S	I	A	A	V	D	F	V	G	W	Y	N	A	H	P	H	F	E	Q	V	S	P	D	L	S	G	A	R	A	V	V	I	G	N
Template Known Secondary structure							S			B	T	T	T	B									S	S																	T	T	T	T	S	T	T												T	T		G	G	G	T	T							S	S							S
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.																					170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	N	T	A	V	E	E	A	L	Y	L	S	N	I	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	V	H	L	I	H	R	R	D	G	F	R	A	E	K	I	L	I	K	R	L	M	D	K	V	E	N	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	N	V	A	L	D	V	A	R	I	L	L	T	D	P	D	V	L	A	R	T	D	I	A	D	H	A	L	E	S	L	R	P	R	G	I	Q	E	V	V	I	V	G	R	R	G	P	L	Q	A	A	F	T	T	L	E	L	R	E	L	A	D	L	D	G	V	D	V	V	I	D	P	A	E	L	D	G	I	T	D
Template Known Secondary structure		S												S						T	T	S											T	T											S	S		G	G	G										G	G	G	G		T	T							G	G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
																																199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.												.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	I	I	L	H	T	N	R	T	L	E	E	V	T	G	D	Q	M	G	V	T	G	V	R	L	R	D	T	Q	N	S	D	N	.	.	.	.	.	.	.	.	.	.	.	I	E	S	L	D	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	D	A	A	A	V	G	K	V	C	K	Q	N	I	K	V	L	R	G	Y	A	D	R	E	P	R	P	G	H	R	R	M	V	F	R	F	L	T	S	P	I	E	I	K	G	K	R	K	V	E	R	I	V	L	G	R	N	E	L	V	S	D	G	S	G	R	V	A	A	K	D	T	G	E	R	E	E	L	P	A
Template Known Secondary structure																							T	S				T	T	S								S									S	S	S															S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	L	F	V	A	I	G	H	S	P	N	T	A	I	F	E	G	Q	L	E	L	E	N	G	Y	I	K	V	Q	S	G	I	H	G	N	A	T	Q	T	S	I	P	G	V	F	A	A	G	D	V	M	D	H	I	Y	R	Q	A	I	T	S	A	G	T	G	C	M	A	A	L	D	A	E	R	Y	L	D	G	L
Query Conservation
Alig confidence														.																		.	.	.	.	.
Template Conservation														.																		.	.	.	.	.
Template Sequence		Q	L	V	V	R	S	V	G	Y	R	G	V	.	P	T	P	G	L	P	F	D	D	Q	S	G	T	I	P	N	V	.	.	.	.	.	G	G	R	I	N	G	S	P	N	E	Y	V	V	G	W	I	K	R	G	P	T	G	V	I	G	T	N	K	K	D	A	Q	D	T	V	D	T	L	I	K	N	L	G	N	A
Template Known Secondary structure		S						S						.			T	T	S			B	T	T	T	T	B					.	.	.	.	.	T	T			T	T		S	S					T						S		S		T	T
Template Predicted Secondary structure														.																		.	.	.	.	.
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.		.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.						.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
		318	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	E	G	A
Template Known Secondary structure				T	T
Template Predicted Secondary structure
Template SS confidence
		390	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions