Job Description P0A9P4 Confidence 100.00% Date Thu Jan 5 11:10:53 GMT 2012 Rank 2 Aligned Residues 303 % Identity 34% Template c1hyuA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:alkyl hydroperoxide reductase subunit f; PDBTitle: crystal structure of intact ahpf Resolution 2.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	G	T	T	K	H	S	K	L	L	I	L	G	S	G	P	A	G	Y	T	A	A	V	Y	A	A	R	A	N	L	Q	P	V	L	I	T	G	M	E	K	G	G	Q	L	T	T	T	T	E	V	E	N	W	P	G	D	P	N	D	L	T	G	P	L	L	M	E	R	M	H	E	H	A	T	K	F	E	T	E	I
Query Conservation
Alig confidence																																								.																					.
Template Conservation																																								.																					.
Template Sequence		L	N	K	R	D	A	Y	D	V	L	I	V	G	S	G	P	A	G	A	A	A	A	V	Y	S	A	R	K	G	I	R	T	G	L	M	G	E	R	.	F	G	G	Q	V	L	D	T	V	D	I	E	N	Y	I	S	V	P	K	T	.	E	G	Q	K	L	A	G	A	L	K	A	H	V	S	D	Y	D	V	D	V
Template Known Secondary structure				T	S											S													T	T								S	S	.	T	T	G	G	G	T	T		S		B			B	T	T	B	S	S	B	.															T	S
Template Predicted Secondary structure																																								.																					.
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.		.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.		.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.						.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.
Query SS confidence																.	.	.	.	.
Query Sequence		I	F	D	H	I	N	K	V	D	L	Q	N	R	P	.	.	.	.	.	F	R	L	N	G	D	N	G	E	Y	T	C	D	A	L	I	I	A	T	G	A	S	A	R	Y	L	G	L	P	S	E	E	A	F	K	G	R	G	V	S	A	C	A	T	C	D	G	F	F	Y	R	N	Q	K	V	A	V	I	G	G	G
Query Conservation																.	.	.	.	.
Alig confidence																.	.	.	.	.
Template Conservation
Template Sequence		I	D	S	Q	S	A	S	K	L	V	P	A	A	T	E	G	G	L	H	Q	I	E	T	A	S	G	A	V	L	K	A	R	S	I	I	I	A	T	G	A	K	W	R	N	M	N	V	P	G	E	D	Q	Y	R	T	K	G	V	T	Y	C	P	H	C	D	G	P	L	F	K	G	K	R	V	A	V	I	G	G	G
Template Known Secondary structure				S										S	S	T	T	S							T	T	S																						T	T	T	T	T	T	T	T	T	T					T	T			G	G	G	G	B	T	S								S
Template Predicted Secondary structure
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	T	A	V	E	E	A	L	Y	L	S	N	I	A	S	E	V	H	L	I	H	R	R	D	G	F	R	A	E	K	I	L	I	K	R	L	M	D	K	V	E	N	G	N	I	I	L	H	T	N	R	T	L	E	E	V	T	G	D	Q	M	G	V	T	G	V	R	L	R	D	T	Q	N	S	D	N	I	E	S	L
Query Conservation
Alig confidence																															.	.	.																																										.
Template Conservation																															.	.	.																																										.
Template Sequence		N	S	G	V	E	A	A	I	D	L	A	G	I	V	E	H	V	T	L	L	E	F	A	P	E	M	K	A	D	.	.	.	Q	V	L	Q	D	K	V	R	S	L	K	N	V	D	I	I	L	N	A	Q	T	T	E	V	K	G	D	G	S	K	V	V	G	L	E	Y	R	D	R	V	S	.	G	D	I	H	S	V
Template Known Secondary structure															B	S							S	S	S	S			S		.	.	.								T	T		T	T						S										S	S	S									T	T	T	.
Template Predicted Secondary structure																															.	.	.																																										.
Template SS confidence
		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.				.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.		.	.	.	.	.	440
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260		.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		D	V	A	G	L	F	V	A	I	G	H	S	P	N	T	A	I	F	E	G	Q	L	E	L	E	.	N	G	Y	I	K	V	Q	S	G	I	H	G	N	A	T	Q	T	S	I	P	G	V	F	A	A	G	D	V	M	D	H	I	Y	R	Q	A	I	T	S	A	G	T	G	C	M	A	A	L	D	A	E	R	Y	L
Query Conservation																											.
Alig confidence																											.								.	.	.	.	.
Template Conservation																																			.	.	.	.	.
Template Sequence		A	L	A	G	I	F	V	Q	I	G	L	L	P	N	T	H	W	L	E	G	A	L	E	R	N	R	M	G	E	I	I	I	D	.	.	.	.	.	A	K	C	E	T	S	V	K	G	V	F	A	A	G	D	C	T	T	V	P	Y	K	Q	I	I	I	A	T	G	E	G	A	K	A	S	L	S	A	F	D	Y	L
Template Known Secondary structure				S											S		G	G	G	T	T	T	S		B		T	T	S		B				.	.	.	.	.	T	T		B		S	S	T	T					S	T	T	B			S	S
Template Predicted Secondary structure																																			.	.	.	.	.
Template SS confidence
		441	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.						.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions