Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9P4
Confidence99.96%DateThu Jan 5 11:10:53 GMT 2012
Rank46Aligned Residues300
% Identity16%Templatec1dxlC_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:dihydrolipoamide dehydrogenase; PDBTitle: dihydrolipoamide dehydrogenase of glycine decarboxylase2 from pisum sativum
Resolution3.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40... ......50..
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Query Sequence  TKHSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQ. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LTTTTEVEN
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Template Sequence  SDENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVEID
Template Known Secondary structure 

B
S

ST


SSSSS
ST


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   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   53......60.........70.........80.........90.........100.........110.........120.........130..
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Query Sequence  WPGDPNDLTGPLLMERMHEHATKFETEIIFDHINKVDLQNRPFRLNGDNGEYTCDALIIATGASARYLGLPSEEAFKGRG
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Template Sequence  LAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFVSPSEISVDTIEGENTVVKGKHIIIATGSDVKSLPGVTIDEKK
Template Known Secondary structure  T
S
SSSS
BTTTB


S





SSS


TTS
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   84.....90.........100.........110.........120.........130.........140.........150.........160...
 
   133......140.........150.........160.........170.........180... ......190.........200.........210
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Query Sequence  VSACATCDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRA. . EKILIKRLMDKVENGNIILHTNRTLEE
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Template Sequence  IVSSTGALALSEIPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVPTMDAEIRKQFQRSLEKQGMKFKLKTKVVG
Template Known Secondary structure 
T
SS

SSS
ST

SSSSSSSSS
TTS

TT




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   164.....170.........180.........190.........200.........210.........220.........230.........240...
 
   211........220.........230.........240.........250........ .260.........270.........280......
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Query Sequence  VTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIFEGQLE. . . . LENGYIKVQSGIHGNATQTSIPGVFAAG
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Template Sequence  VDTSGDGVKL. . TVEPSAGGEQTIIEADVVLVSAGRTPFTSGLNLDKIGVETDKLGRILVN. . . . . ERFSTNVSGVYAIG
Template Known Secondary structure 
B
SSSS
B
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B

SSSS

B



S





TT


TTT




TTS




.....TTSB
SSTT
S
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   244.....250... ......260.........270.........280.........290.........300.. .......310......
 
   287..290.........300.........310.
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Query Sequence  DVMDHIYRQAITSAGTGCMAALDAE
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Template Sequence  DVIPGPM. LAHKAEEDGVACVEYLA
Template Known Secondary structure  TTSSS

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   317..320... ......330.........340
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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