Return to main results Retrieve Phyre Job Id

Job DescriptionP46474
Confidence2.06%DateThu Jan 5 12:04:13 GMT 2012
Rank68Aligned Residues42
% Identity14%Templatec3seeA_
PDB info PDB header:sugar binding proteinChain: A: PDB Molecule:hypothetical sugar binding protein; PDBTitle: crystal structure of a hypothetical sugar binding protein (bt_4411)2 from bacteroides thetaiotaomicron vpi-5482 at 1.25 a resolution
Resolution1.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1223......1230.........1240.........1250.........1260....
Predicted Secondary structure 












Query SS confidence 









































Query Sequence  VFAASKVLGPLWSKVSILRYHISGPLDDPQINEVLRQPRKEK
Query Conservation                       
 
    
 
           
Alig confidence 









































Template Conservation 
 





 
 

 

 


  

   
  
   




  
Template Sequence  AFLGQRITDGLEKGIYVLTFYAKAKEAGTPVSVYIKQTNEEK
Template Known Secondary structure 
S


SSSSTT
SS

B
Template Predicted Secondary structure 












Template SS confidence 









































   90.........100.........110.........120.........130.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions