Job Description P54746 Confidence 93.31% Date Thu Jan 5 12:06:04 GMT 2012 Rank 29 Aligned Residues 164 % Identity 13% Template d2c1ia1 SCOP info 7-stranded beta/alpha barrel Glycoside hydrolase/deacetylase NodB-like polysaccharide deacetylase Resolution 1.35

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	I	L	C	R	L	E	Q	D	N	E	Y	K	Y	Y	V	L	D	G	Q	T	A	I	L	E	D	Y	F	A	V	K	P	E	N	K	D	R	V	K	K	Q	V	E	A	G	K	L	I	I	G	P	W	Y	T	Q	T	D	T	T	I	V	S	A	E	S	I	V	R	N	L	M	Y	G	M	R	D	C	L	A
Query Conservation
Alig confidence																							.	.	.	.	.	.									.	.	.
Template Conservation																							.	.	.	.	.	.									.	.	.
Template Sequence		P	Q	V	L	E	T	L	A	K	Y	D	I	K	A	T	F	F	V	L	G	K	.	.	.	.	.	.	N	V	S	G	N	E	D	L	.	.	.	V	K	R	I	K	S	E	G	H	V	V	G	N	H	S	W	S	H	P	I	L	S	Q	L	S	L	D	E	A	K	K	Q	I	T	D	T	E	D	V	L	T	K
Template Known Secondary structure											T	T									G	G	.	.	.	.	.	.	G	T	T	T					.	.	.							T	T								S	S				G	G	G	S
Template Predicted Secondary structure																							.	.	.	.	.	.									.	.	.
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.							.	.	.	.	.	310	.	.				.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
			115	.	.	.	.	120	.	.	.	.	.	.	.	.	.		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure		.																.
Query SS confidence		.																.
Query Sequence		.	F	G	E	P	M	K	I	G	Y	L	P	D	S	F	G	.	M	S	G	Q	L	P	H	I	Y	N	G	F	G	I	T	R	T	M	F	W	R	G	C	S	E	R	H	G	T	D	K	T	E	F	L	W	Q	S	S	D	G	S	E	V	T	A	Q	V	L	P	L	G	Y	A	I	G	K	Y	L	P	A	D	E
Query Conservation		.																.
Alig confidence		.											.	.				.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	L	G	S	S	S	K	L	M	R	P	.	.	P	Y	G	A	I	T	D	D	I	R	N	S	L	D	L	S	F	I	M	W	D	V	D	S	L	D	W	K	S	K	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				S									.	.	G	G	G									T	S	S							S											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure													.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		355	.	.	.	.	360	.	.	.	.	.			.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		N	G	L	R	K	R	L	D	S	Y	F	D	V	L	E	K	A	S	V	T	K	E	I	L	L	P	N	G	H	D	Q	M	P	L	Q	Q	.	N	I	F	E	V	M	D	K	L	R	E	I	Y	P	Q	R	K	F	V	M	S	R	F	E	E	V	F	E	K
Query Conservation																																						.
Alig confidence		.	.	.	.	.	.																					.	.									.														.	.	.	.
Template Conservation		.	.	.	.	.	.																					.	.																							.	.	.	.
Template Sequence		.	.	.	.	.	.	E	A	S	I	L	T	E	I	Q	H	Q	V	A	N	G	S	I	V	L	M	.	.	H	D	I	H	S	P	T	V	N	A	L	P	R	V	I	E	Y	L	K	N	Q	G	.	.	.	.	Y	T	F	V	T	I	P	E	M	L	N	T
Template Known Secondary structure		.	.	.	.	.	.														T	T						.	.		T	T	S																	T	T	.	.	.	.											G	G
Template Predicted Secondary structure		.	.	.	.	.	.																					.	.																							.	.	.	.
Template SS confidence
								397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.			.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.					.	440	.	.	.	.	.	.	.	.	.	450

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions