Job Description P54746 Confidence 94.80% Date Thu Jan 5 12:06:04 GMT 2012 Rank 27 Aligned Residues 173 % Identity 15% Template d1ny1a_ SCOP info 7-stranded beta/alpha barrel Glycoside hydrolase/deacetylase NodB-like polysaccharide deacetylase Resolution 1.80

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure																																																				.
Query SS confidence																																																				.
Query Sequence		E	E	I	L	C	R	L	E	Q	D	N	E	Y	K	Y	Y	V	L	D	G	Q	T	A	I	L	E	D	Y	F	A	V	K	P	E	N	K	D	R	V	K	K	Q	V	E	A	G	K	L	I	I	.	G	P	W	Y	T	Q	T	D	T	T	I	V	S	A	E	S	I	V	R	N	L	M	Y	G	M	R	D	C	L
Query Conservation																																																				.
Alig confidence																							.	.	.	.	.	.									.	.	.									.				.
Template Conservation																							.	.	.	.	.	.									.	.	.									.
Template Sequence		P	K	V	L	D	V	L	K	K	H	R	V	T	G	T	F	F	V	T	G	H	.	.	.	.	.	.	F	V	K	D	Q	P	Q	L	.	.	.	I	K	R	X	S	D	E	G	.	H	I	I	G	N	H	S	F	H	H	P	D	L	T	T	K	T	A	D	Q	I	Q	D	E	L	D	S	V	N	E	E	V	Y
Template Known Secondary structure											T	T											.	.	.	.	.	.									.	.	.							T	T	.								S	S				G	G	G	S
Template Predicted Secondary structure																							.	.	.	.	.	.									.	.	.									.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.							.	.	.	.	.	.	.	110				.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		114		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		A	.	F	G	E	P	M	K	I	G	Y	L	P	D	S	F	G	M	S	G	Q	L	P	H	I	Y	N	G	F	G	I	T	R	T	M	F	W	R	G	C	S	E	R	H	G	T	D	K	T	E	F	L	W	Q	S	S	D	G	S	E	V	T	A	Q	V	L	P	L	G	Y	A	I	G	K	Y	L	P	A	D	E
Query Conservation			.
Alig confidence			.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	T	G	K	Q	D	N	L	Y	L	R	P	P	R	G	V	F	S	E	Y	V	L	K	E	T	K	R	L	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	T	V	F	W	S	V	A	F	V	D	W	K	I	N	N	Q	K
Template Known Secondary structure					S										G	G	G													T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			B			S	B			S				G	G	G
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.																																.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		N	G	L	R	K	R	L	D	S	Y	F	D	V	L	E	K	A	S	V	T	K	E	I	L	L	P	N	G	H	D	Q	M	P	L	Q	Q	.	N	I	F	E	V	M	D	K	L	R	E	I	Y	P	Q	R	K	F	V	M	S	R	F	E	E	V	F	E	K	I	E
Query Conservation																																						.
Alig confidence			.	.	.	.	.																					.	.									.														.	.	.	.
Template Conservation			.	.	.	.	.																					.	.																							.	.	.	.
Template Sequence		G	.	.	.	.	.	K	K	Y	A	Y	D	H	X	I	K	Q	A	H	P	G	A	I	Y	L	L	.	.	H	T	V	S	R	D	N	A	E	A	L	D	D	A	I	T	D	L	K	K	Q	G	.	.	.	.	Y	T	F	K	S	I	D	D	L	X	F	E	K	E
Template Known Secondary structure			.	.	.	.	.											T			T	T						.	.		S		S	T	T																T	.	.	.	.
Template Predicted Secondary structure			.	.	.	.	.																					.	.																							.	.	.	.
Template SS confidence
		201						.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.			.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.					.	.	.	.	.	.	250	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions