Return to main results Retrieve Phyre Job Id

Job DescriptionP54746
Confidence100.00%DateThu Jan 5 12:06:04 GMT 2012
Rank8Aligned Residues281
% Identity15%Templated1k1xa3
SCOP info7-stranded beta/alpha barrel Glycoside hydrolase/deacetylase 4-alpha-glucanotransferase, N-terminal domain
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20 .........30.........40.........50.........60.........70.........
Predicted Secondary structure 









.










Query SS confidence 



















.


























































Query Sequence  MKAVSRVHITPHMHWDREWY. FTTEESRILLVNNMEEILCRLEQDNEYKYYVLDGQTAILEDYFAVKPENKDRVKKQVEA
Query Conservation        
 

 


 
  

. 
              

  
   
   
                 
     

 

  
Alig confidence 


.















.







...

















.




























Template Conservation 
 
.     
 
 


 
           ...  
 
 
  
      
 .    
  


      
      
 
   
Template Sequence  MER. INFIFGIHNHQPLGNFGWVFEEAYN. . . RSYRPFMEILEEFPEMKV. NVHFSGPLLEWIEENKPDYLDLLRSLIKR
Template Known Secondary structure 


.


TT

...TTT
TT

.

T
Template Predicted Secondary structure 

.








...


.


Template SS confidence 















































































   1.. ......10.........20........ .30.........40...... ...50.........60.........70.....
 
   80.... .....90.........100.........110.........120.........130.........140.........150 .......
Predicted Secondary structure 

.
























.





Query SS confidence 




.

































































.






Query Sequence  GKLII. GPWYTQTDTTIVSAESIVRNLMYGMRDCLAFGEPMKIGYLPDSFGMSGQLPHIYNGFGITRTMFWR. GCSERHG
Query Conservation 


 
.

  
  

 
   





   
      

    
 
  
 

 
  




   

      
.       
Alig confidence 




.









































.






















.






Template Conservation 
 

     
 
    
        
          

  
 
 
 

.   
      
   
    
 
         
Template Sequence  GQLEIVVAGFYEPVLAAIPKEDRLVQIEMLKDYARKLGYDAKGVWLTE. RVWQPELVKSLREAGIEYVVVDDYHFMSAGL
Template Known Secondary structure  T
B

TT


GGGS
TT




GG.G
B
TTTT

T
Template Predicted Secondary structure 
















.











Template SS confidence 















































































   76...80.........90.........100.........110.........120... ......130.........140.........150....
 
   158.160.... .....170.........180.........190.........200.........210......... 220......
Predicted Secondary structure 



.

























.






.........
Query SS confidence 






.






















































.






. . . . . . . . .
Query Sequence  TDKTEFL. WQSSDGSEVTAQVLPLGYAIGKYLPADENGLRKRLDSYFDVLEKASVTKEILLPN. GHDQMPL. . . . . . . . .
Query Conservation       
 .
 
 


 
 
      
                                 
   .
 
    .........
Alig confidence 






.












.














...






















.






.........
Template Conservation                   
 
 . 

  

  
 
   ...                  
 
  


 

           
Template Sequence  SKEELFWPYYTEDGGEVITVF. PIDEKLRYLIPFRPV. . . KKTIEYLESLTSDDPSKVAVFHDDGEKFGVWPGTYEWVYE
Template Known Secondary structure 
GGG
SS
TT.
TTTS
...TT

S
TT
GGGTTTSTTTT
Template Predicted Secondary structure 









.









...

















Template SS confidence 















































































   155....160.........170..... ....180.........190 .........200.........210.........220.........230
 
   227..230.........240.........250.........260. ........270.........280.........290.........
Predicted Secondary structure 








.















Query SS confidence 


































.





































Query Sequence  QQNIFEVMDKLREIYPQRKFVMSRFEEVFEKIEAQ. RDNLATLKGEFIDGKYMRVHRTIGSTRMDIKIAHARIE
Query Conservation         
   
          

   

      .   

   

           
  


   
   
  
Alig confidence 















...















.







.....
























Template Conservation    

  
   
     ...
   
 

 
    
     
   
.....      
 
                
Template Sequence  KGWLREFFDAITSNEK. . . INLMTYSEYLSKFTPRGLVYLPIAS. . . . . YFEMSEWSLPAKQAKLFVEFVEQLK
Template Known Secondary structure  T

TT...






B



SB
.....
TTTS
Template Predicted Secondary structure 



...










.....









Template SS confidence 









































































   231........240...... ...250.........260.........270. ........280.........290......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions