Job Description P54746 Confidence 100.00% Date Thu Jan 5 12:06:04 GMT 2012 Rank 8 Aligned Residues 281 % Identity 15% Template d1k1xa3 SCOP info 7-stranded beta/alpha barrel Glycoside hydrolase/deacetylase 4-alpha-glucanotransferase, N-terminal domain Resolution 2.40

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		M	K	A	V	S	R	V	H	I	T	P	H	M	H	W	D	R	E	W	Y	.	F	T	T	E	E	S	R	I	L	L	V	N	N	M	E	E	I	L	C	R	L	E	Q	D	N	E	Y	K	Y	Y	V	L	D	G	Q	T	A	I	L	E	D	Y	F	A	V	K	P	E	N	K	D	R	V	K	K	Q	V	E	A
Query Conservation																						.
Alig confidence					.																	.									.	.	.																			.
Template Conservation					.																										.	.	.																			.
Template Sequence		M	E	R	.	I	N	F	I	F	G	I	H	N	H	Q	P	L	G	N	F	G	W	V	F	E	E	A	Y	N	.	.	.	R	S	Y	R	P	F	M	E	I	L	E	E	F	P	E	M	K	V	.	N	V	H	F	S	G	P	L	L	E	W	I	E	E	N	K	P	D	Y	L	D	L	L	R	S	L	I	K	R
Template Known Secondary structure					.													T	T												.	.	.		T									T	T		T	T				.																													T
Template Predicted Secondary structure					.																										.	.	.																			.
Template SS confidence
		1	.	.		.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.				.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.	.
Predicted Secondary structure							.																																																																			.
Query SS confidence							.																																																																			.
Query Sequence		G	K	L	I	I	.	G	P	W	Y	T	Q	T	D	T	T	I	V	S	A	E	S	I	V	R	N	L	M	Y	G	M	R	D	C	L	A	F	G	E	P	M	K	I	G	Y	L	P	D	S	F	G	M	S	G	Q	L	P	H	I	Y	N	G	F	G	I	T	R	T	M	F	W	R	.	G	C	S	E	R	H	G
Query Conservation							.																																																																			.
Alig confidence							.																																											.																								.
Template Conservation																																																		.
Template Sequence		G	Q	L	E	I	V	V	A	G	F	Y	E	P	V	L	A	A	I	P	K	E	D	R	L	V	Q	I	E	M	L	K	D	Y	A	R	K	L	G	Y	D	A	K	G	V	W	L	T	E	.	R	V	W	Q	P	E	L	V	K	S	L	R	E	A	G	I	E	Y	V	V	V	D	D	Y	H	F	M	S	A	G	L
Template Known Secondary structure		T						B			T	T				G	G	G	S																			T	T									G	G	.	G		B		T	T								T	T															T
Template Predicted Secondary structure																																																		.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		158	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.		220	.	.	.	.	.	.
Predicted Secondary structure									.																																																								.								.	.	.	.	.	.	.	.	.
Query SS confidence									.																																																								.								.	.	.	.	.	.	.	.	.
Query Sequence		T	D	K	T	E	F	L	.	W	Q	S	S	D	G	S	E	V	T	A	Q	V	L	P	L	G	Y	A	I	G	K	Y	L	P	A	D	E	N	G	L	R	K	R	L	D	S	Y	F	D	V	L	E	K	A	S	V	T	K	E	I	L	L	P	N	.	G	H	D	Q	M	P	L	.	.	.	.	.	.	.	.	.
Query Conservation									.																																																								.								.	.	.	.	.	.	.	.	.
Alig confidence									.														.																.	.	.																								.								.	.	.	.	.	.	.	.	.
Template Conservation																							.																.	.	.
Template Sequence		S	K	E	E	L	F	W	P	Y	Y	T	E	D	G	G	E	V	I	T	V	F	.	P	I	D	E	K	L	R	Y	L	I	P	F	R	P	V	.	.	.	K	K	T	I	E	Y	L	E	S	L	T	S	D	D	P	S	K	V	A	V	F	H	D	D	G	E	K	F	G	V	W	P	G	T	Y	E	W	V	Y	E
Template Known Secondary structure			G	G	G		S	S							T	T							.										T	T	T	S			.	.	.									T	T			S		T	T									G	G	G	T	T	T	S	T	T						T	T
Template Predicted Secondary structure																							.																.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190				.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.		.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.
Query SS confidence																																					.
Query Sequence		Q	Q	N	I	F	E	V	M	D	K	L	R	E	I	Y	P	Q	R	K	F	V	M	S	R	F	E	E	V	F	E	K	I	E	A	Q	.	R	D	N	L	A	T	L	K	G	E	F	I	D	G	K	Y	M	R	V	H	R	T	I	G	S	T	R	M	D	I	K	I	A	H	A	R	I	E
Query Conservation																																					.
Alig confidence																		.	.	.																	.									.	.	.	.	.
Template Conservation																		.	.	.																										.	.	.	.	.
Template Sequence		K	G	W	L	R	E	F	F	D	A	I	T	S	N	E	K	.	.	.	I	N	L	M	T	Y	S	E	Y	L	S	K	F	T	P	R	G	L	V	Y	L	P	I	A	S	.	.	.	.	.	Y	F	E	M	S	E	W	S	L	P	A	K	Q	A	K	L	F	V	E	F	V	E	Q	L	K
Template Known Secondary structure		T														T	T	.	.	.																		B					S	B		.	.	.	.	.		T	T					T	S
Template Predicted Secondary structure																		.	.	.																										.	.	.	.	.
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.				.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.						.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions