Job Description P54746 Confidence 97.16% Date Thu Jan 5 12:06:04 GMT 2012 Rank 23 Aligned Residues 221 % Identity 12% Template c3s6oD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:polysaccharide deacetylase family protein; PDBTitle: crystal structure of a polysaccharide deacetylase family protein from2 burkholderia pseudomallei Resolution 1.85 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																																																															.
Query SS confidence																																																															.
Query Sequence		S	R	I	L	L	V	N	N	M	E	E	I	L	C	R	L	E	Q	D	N	E	Y	K	Y	Y	V	L	D	G	Q	T	A	I	L	E	D	Y	F	A	V	K	P	E	N	K	D	R	V	K	K	Q	V	E	A	G	K	L	I	I	G	P	.	W	Y	T	Q	T	D	T	T	I	V	S	A	E	S	I	V	R	N
Query Conservation																																																															.
Alig confidence																																.	.	.	.	.	.									.	.	.										.					.
Template Conservation																																.	.	.	.	.	.									.	.	.										.
Template Sequence		Y	E	Y	G	S	R	A	G	V	W	R	I	L	R	E	F	D	K	R	G	L	P	L	T	V	F	G	V	G	M	.	.	.	.	.	.	A	I	E	R	H	P	E	L	.	.	.	A	R	A	F	V	E	L	G	H	.	E	I	A	C	H	G	W	R	W	I	H	Y	Q	D	M	T	P	E	R	E	A	E	H
Template Known Secondary structure								T													T											.	.	.	.	.	.									.	.	.							T	T		.							S	S		S			T	T
Template Predicted Secondary structure																																.	.	.	.	.	.									.	.	.										.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.							.	.	.	.	110	.	.	.				.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		105	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		L	M	Y	G	M	R	D	C	L	A	.	F	G	E	P	M	K	I	G	Y	L	P	D	S	F	G	M	S	G	Q	L	P	H	I	Y	N	G	F	G	I	T	R	T	M	F	W	R	G	C	S	E	R	H	G	T	D	K	T	E	F	L	W	Q	S	S	D	G	S	E	V	T	A	Q	V	L	P	L	G	Y	A
Query Conservation												.
Alig confidence												.												.	.																												.	.	.	.	.
Template Conservation																								.	.																												.	.	.	.	.
Template Sequence		M	R	L	G	M	E	A	I	E	R	V	T	G	V	R	P	L	G	W	Y	T	G	.	.	R	D	S	P	N	T	H	R	L	V	A	E	Y	G	G	F	L	Y	D	S	D	H	Y	G	D	D	L	.	.	.	.	.	P	F	W	M	D	V	E	V	S	G	G	A	S	V	P	Q	L	I	V	P	Y	T	L	D
Template Known Secondary structure														S									S	.	.	S			T	T												S							S		S	S	.	.	.	.	.									T	T	S												S	S
Template Predicted Secondary structure																								.	.																												.	.	.	.	.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.			.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.						.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		184								.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.		.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.																																																												.
Query SS confidence			.	.	.	.	.	.	.																																																												.
Query Sequence		I	.	.	.	.	.	.	.	G	K	Y	L	P	A	D	E	N	G	L	R	K	R	L	D	S	Y	F	D	V	L	E	K	A	S	V	T	K	E	I	L	L	P	N	G	H	D	Q	M	P	L	Q	Q	N	I	F	E	V	M	D	K	L	R	E	I	Y	P	Q	.	R	K	F	V	M	S	R	F	E	E	V	F
Query Conservation			.	.	.	.	.	.	.																																																												.
Alig confidence			.	.	.	.	.	.	.																																																												.
Template Conservation
Template Sequence		A	N	D	M	R	F	A	T	P	Q	G	F	N	T	A	D	H	F	F	H	Y	L	R	D	A	F	D	V	L	Y	E	E	G	D	E	A	P	K	M	M	S	I	G	M	H	C	R	L	L	G	R	P	G	R	F	R	A	L	Q	R	F	L	D	H	I	E	R	H	D	R	V	W	V	A	R	R	V	E	I	A
Template Known Secondary structure		S	B	G	G	G	G	G	S	S	S				S																			T	T	T	S										T	T	T	T	T	S																T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
		256	.	.	.	260	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	I	E	A	Q	R	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	H	W	R	E	H	H	P
Template Known Secondary structure								S
Template Predicted Secondary structure
Template SS confidence
		299	300	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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