Job Description P54746 Confidence 97.93% Date Thu Jan 5 12:06:04 GMT 2012 Rank 21 Aligned Residues 219 % Identity 14% Template c3rxzA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:polysaccharide deacetylase; PDBTitle: crystal structure of putative polysaccharide deacetylase from2 mycobacterium smegmatis Resolution 2.01 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																																																															.
Query SS confidence																																																															.
Query Sequence		S	R	I	L	L	V	N	N	M	E	E	I	L	C	R	L	E	Q	D	N	E	Y	K	Y	Y	V	L	D	G	Q	T	A	I	L	E	D	Y	F	A	V	K	P	E	N	K	D	R	V	K	K	Q	V	E	A	G	K	L	I	I	G	P	.	W	Y	T	Q	T	D	T	T	I	V	S	A	E	S	I	V	R	N
Query Conservation																																																															.
Alig confidence																																.	.	.	.	.	.									.	.	.										.					.
Template Conservation																																.	.	.	.	.	.									.	.	.										.
Template Sequence		Q	A	Y	G	P	L	V	G	V	P	R	L	L	G	I	L	D	E	F	N	V	P	G	T	F	F	V	P	G	Y	.	.	.	.	.	.	T	A	H	R	H	P	E	P	.	.	.	I	R	S	I	A	R	A	G	H	.	E	I	A	H	H	G	Y	L	H	E	S	L	V	G	A	D	E	D	T	E	R	K	I
Template Known Secondary structure								T												T	T											.	.	.	.	.	.					S				.	.	.							T	T		.							S	S					T	T
Template Predicted Secondary structure																																.	.	.	.	.	.									.	.	.										.
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.							.	.	.	.	.	.	.	90				.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		L	M	Y	G	M	R	D	C	L	A	F	G	E	P	M	K	I	G	Y	L	P	D	S	F	G	M	S	G	Q	L	P	H	I	Y	N	G	F	G	I	T	R	T	M	F	W	R	G	C	S	E	R	H	G	T	D	K	T	E	F	L	W	Q	S	S	D	G	S	E	V	T	A	Q	V	L	P	L	G	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																																																		.	.	.	.	.	.	.															.	.	.						.	.	.
Template Conservation																																																		.	.	.	.	.	.	.															.	.	.
Template Sequence		L	T	R	G	I	E	A	L	E	E	V	A	G	V	H	P	V	G	Y	R	A	P	X	W	E	X	N	W	H	T	P	K	L	L	A	E	F	G	F	L	Y	D	S	T	L	X	D	S	.	.	.	.	.	.	.	D	H	P	Y	E	L	A	V	G	D	G	S	L	V	.	.	.	E	L	P	V	S	W	A	L
Template Known Secondary structure														S									G	G	G				T	T								T	T		S							S		.	.	.	.	.	.	.	S	S				B			T	T	S				.	.	.						G	G	G
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.															.	.	.
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170								.	.	.	.	.	.	.	.	.	180	.	.	.	.				.	.	.	.	.	190	.	.
									182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.		.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																																																															.
Query SS confidence		.	.	.	.	.	.	.																																																															.
Query Sequence		.	.	.	.	.	.	.	Y	A	I	G	K	Y	L	P	A	D	E	N	G	L	R	K	R	L	D	S	Y	F	D	V	L	E	K	A	S	V	T	K	E	I	L	L	P	N	G	H	D	Q	M	P	L	Q	Q	N	I	F	E	V	M	D	K	L	R	E	I	Y	P	Q	.	R	K	F	V	M	S	R	F	E	E
Query Conservation		.	.	.	.	.	.	.																																																															.
Alig confidence		.	.	.	.	.	.	.																																																															.
Template Conservation
Template Sequence		D	D	W	Q	Q	Y	C	F	V	P	D	F	S	G	T	G	L	I	E	T	P	A	K	A	I	E	L	W	R	A	E	L	N	A	X	R	D	I	G	G	A	W	V	L	T	N	H	P	F	L	S	G	R	P	G	R	A	A	A	L	R	E	F	I	A	E	V	C	A	X	D	D	V	W	V	A	G	X	S	Q
Template Known Secondary structure		B	S							B	T	T	T	B		S	S																							T													T	S																T		T	T
Template Predicted Secondary structure
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
		254	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	F	E	K	I	E	A	Q	R	D	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	A	E	H	V	R	A	Q	K	L	T
Template Known Secondary structure									T
Template Predicted Secondary structure
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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