Job Description P54746 Confidence 100.00% Date Thu Jan 5 12:06:04 GMT 2012 Rank 1 Aligned Residues 835 % Identity 29% Template c2wyhA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:alpha-mannosidase; PDBTitle: structure of the streptococcus pyogenes family gh38 alpha-2 mannosidase Resolution 1.90 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	A	V	S	R	V	H	I	T	P	H	M	H	W	D	R	E	W	Y	F	T	T	E	E	S	R	I	L	L	V	N	N	M	E	E	I	L	C	R	L	E	Q	D	N	E	Y	K	Y	Y	V	L	D	G	Q	T	A	I	L	E	D	Y	F	A	V	K	P	E	N	K	D	R	V	K	K	Q	V	E	A	G
Query Conservation
Alig confidence					.
Template Conservation					.
Template Sequence		M	A	T	.	K	K	V	H	I	I	S	H	S	H	W	D	R	E	W	Y	M	A	Y	E	Q	H	H	M	R	L	I	N	L	I	D	D	L	L	E	V	F	Q	T	D	P	D	F	H	S	F	H	L	D	G	Q	T	I	I	L	D	D	Y	L	K	V	R	P	E	R	E	P	E	I	R	Q	A	I	A	S	G
Template Known Secondary structure					.								B		B			S	S	S	S	S																								T	T							T	T	B	T											G	G	G										T	T
Template Predicted Secondary structure					.
Template SS confidence
		1	.	.		.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.	.	.	.	.
Query Sequence		K	L	I	I	G	P	W	Y	T	Q	T	D	T	T	I	V	S	A	E	S	I	V	R	N	L	M	Y	G	M	R	D	C	L	A	F	G	E	P	M	K	I	G	Y	L	P	D	S	F	G	M	S	G	Q	L	P	H	I	Y	N	G	F	G	I	T	R	T	M	F	W	R	G	.	.	.	.	.	.	.	.	.
Query Conservation																																																																									.	.	.	.	.	.	.	.	.
Alig confidence																																																																									.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	L	R	I	G	P	F	Y	I	L	Q	D	D	F	L	T	S	S	E	S	N	V	R	N	M	L	I	G	K	E	D	C	D	R	W	G	A	S	V	P	L	G	Y	F	P	D	T	F	G	N	M	G	Q	T	P	Q	L	M	L	K	A	G	L	Q	A	A	A	F	G	R	G	I	R	P	T	G	F	N	N	Q
Template Known Secondary structure		S					S	B	S	S		B		S	T	T	S																				T				S	S				S	S		S	S	B		T	T							T	T	T								S	S						S	S	S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
				152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	C	S	E	R	H	G	T	D	K	T	E	F	L	W	Q	S	S	D	G	S	E	V	T	A	Q	V	L	P	L	G	Y	A	I	G	K	Y	L	P	A	D	E	N	G	L	R	K	R	L	D	S	Y	F	D	V	L	E	K	A	S	V	T	K	E	I	L	L	P	N	G	H	D	Q	M	P	L	Q	Q	N
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		V	D	T	S	E	K	Y	S	S	Q	F	S	E	I	S	W	Q	G	P	D	N	S	R	I	L	G	L	L	F	A	N	W	Y	S	N	G	N	E	I	P	T	T	E	A	E	A	R	L	F	W	D	K	K	L	A	D	A	E	R	F	A	S	T	K	H	L	L	M	M	N	G	C	D	H	Q	P	V	Q	L	D
Template Known Secondary structure				T	T		T	T			S	S	S							T	T										T	T		T	T	T	T		S			S	S																				S	S	S									B	T					T	T
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.		.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.			280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure																																		.																			.	.
Query SS confidence																																		.																			.	.
Query Sequence		I	F	E	V	M	D	K	L	R	E	I	Y	P	Q	R	K	F	V	M	S	R	F	E	E	V	F	E	K	I	E	A	Q	.	R	D	N	L	A	T	L	K	G	E	F	I	D	G	K	Y	M	R	.	.	V	H	R	T	I	G	S	T	R	M	D	I	K	I	A	H	A	R	I	E	N	K	I	V	N	L	L
Query Conservation																																		.																			.	.
Alig confidence																																		.																			.	.
Template Conservation
Template Sequence		V	T	K	A	I	A	L	A	N	Q	L	Y	P	D	Y	E	F	V	H	S	C	F	E	D	Y	L	A	D	L	A	D	D	L	P	E	N	L	S	T	V	Q	G	E	I	T	S	Q	E	T	D	G	W	Y	T	L	A	N	T	A	S	A	R	I	Y	L	K	Q	A	N	T	R	V	S	R	Q	L	E	N	I	T
Template Known Secondary structure														T	T																			S		S							S		B	S		T	T	S		S	S	S	S		G	G	G	G	G	T	T																	T
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		E	P	L	A	T	L	A	W	T	L	G	F	E	Y	H	H	G	L	L	E	K	M	W	K	E	I	L	K	N	H	A	H	D	S	I	G	C	C	C	S	D	K	V	H	R	E	I	V	A	R	F	E	L	A	E	D	M	A	D	N	L	I	R	F	Y	M	R	K	I	A	D	N	M	P	Q	S	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence																																																																														.	.	.	.
Template Conservation
Template Sequence		E	P	L	A	A	M	A	Y	E	V	T	S	T	Y	P	H	D	Q	L	R	Y	A	W	K	T	L	M	Q	N	H	P	H	D	S	I	C	G	C	S	V	D	S	V	H	R	E	M	M	T	R	F	E	K	A	Y	E	V	G	H	Y	L	A	K	E	A	A	K	Q	I	A	D	A	I	D	T	R	D	F	P	M
Template Known Secondary structure													S																T	T		B					T	T		S																																	T	B			T	T	S		T
Template Predicted Secondary structure
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
		383	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.																								.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	A	D	K	L	V	L	F	N	L	M	P	W	P	R	E	E	V	I	N	T	T	V	R	L	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	Q	F	N	L	R	D	D	R	G	Q	P	V	P	Y	F	I	R	H	A	R	E	I	D	P	G	L	I	D	R
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template Conservation																																																																								.
Template Sequence		D	S	Q	P	F	V	L	F	N	T	S	G	H	S	K	T	S	V	A	E	L	S	L	T	W	K	K	Y	H	F	G	Q	R	F	P	K	E	V	Y	Q	E	A	Q	E	Y	L	A	R	L	S	Q	S	F	Q	I	I	D	T	S	G	Q	V	R	P	E	A	E	I	L	G	.	T	S	I	A	F	D	Y	D	L
Template Known Secondary structure		T	S									S	S	S																		T	T	S															T			S							T	T			B		T	T						.
Template Predicted Secondary structure																																																																								.
Template SS confidence
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.		470	.	.	.	.	.	.	.	.
		440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	V	H	Y	G	N	Y	D	P	F	M	E	F	D	I	Q	I	N	Q	I	V	P	S	M	G	Y	R	T	L	Y	I	E	A	N	Q	P	G	N	V	I	A	A	K	S	D	A	E	G	I	L	E	N	A	F	W	Q	I	A	L	N	E	D	G	S	L	Q	L	V	D	K	D	S	G	V	R	Y	D	R	V
Query Conservation
Alig confidence																																												.	.	.
Template Conservation																																												.	.	.
Template Sequence		P	K	R	S	F	R	E	P	Y	F	A	I	K	V	R	L	R	L	P	I	T	L	P	A	M	S	W	K	T	L	A	L	K	L	G	N	T	V	S	L	Y	D	.	.	.	D	S	N	Q	C	L	E	N	G	F	L	K	V	M	I	Q	T	D	G	R	L	T	I	T	D	K	Q	S	G	L	I	Y	Q	D	L
Template Known Secondary structure			S	S	S																				T	T															S			.	.	.	T	T	T	T					S	S							T	T	S							T	T	T
Template Predicted Secondary structure																																												.	.	.
Template SS confidence
		479	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520				.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.
		520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.		.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.																	.	580	.	.
Predicted Secondary structure																																						.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	Q	I	E	E	S	S	D	D	G	D	E	Y	D	Y	S	P	A	K	E	E	W	V	I	T	A	A	N	A	K	P	Q	C	D	I	I	.	H	E	A	W	Q	S	R	A	V	I	R	Y	D	M	A	V	P	L	N	L	S	E	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	A	R	Q
Query Conservation																																						.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																						.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	R	F	E	D	C	G	D	I	G	N	E	Y	I	S	R	Q	P	N	H	D	Q	P	F	Y	A	D	Q	G	T	I	K	L	N	I	I	S	N	T	A	Q	V	A	E	L	E	I	Q	Q	T	F	A	I	P	I	S	A	D	K	L	L	Q	A	E	M	E	A	V	I	D	I	T	E	R	Q	A	R	R	S	Q
Template Known Secondary structure		S									S		S	S						T	T						G	G	G	S											S	S														S	S	B		T								T	T			G	G	G					B		S
Template Predicted Secondary structure
Template SS confidence
		562	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.
		583	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	G	R	V	G	V	V	L	V	V	T	L	S	H	N	S	R	R	I	D	V	D	I	N	L	D	N	Q	A	D	D	H	R	L	R	V	L	V	P	T	P	F	N	T	D	S	V	L	A	D	T	Q	F	G	S	L	T	R	P	V	N	D	S	A	M	N	N	W	Q	Q	E	G	W	K	E	A	P	V	P
Query Conservation
Alig confidence																																																																			.	.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.	.
Template Sequence		E	K	A	E	L	T	L	T	T	L	I	R	M	E	K	N	N	P	R	L	Q	F	T	T	R	F	D	N	Q	M	T	N	H	R	L	R	V	L	F	P	T	H	L	K	T	D	H	H	L	A	D	S	I	F	E	T	V	K	R	P	N	H	P	D	A	.	.	.	.	.	.	.	T	F	W	K	N	P	S	N
Template Known Secondary structure																T	T		S														S														S							T	T							S	S			T	.	.	.	.	.	.	.	T	T				S
Template Predicted Secondary structure																																																																			.	.	.	.	.	.	.
Template SS confidence
		642	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.								.	.	.	710	.	.	.	.
		663	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	W	N	M	L	N	Y	V	A	L	Q	E	G	R	N	G	M	A	V	F	S	E	G	L	R	E	F	E	V	I	G	E	E	K	K	T	F	A	I	T	L	L	R	G	V	G	L	L	G	K	E	D	L	L	L	R	P	G	R	P	S	G	I	K	M	P	V	P	D	S	Q	L	R	G	L	L	S	C	R	L
Query Conservation
Alig confidence																																	.																						.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.																						.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	Q	H	Q	E	C	F	V	S	L	F	D	G	E	N	G	V	T	I	G	N	Y	G	L	N	E	Y	E	I	L	P	.	D	T	N	T	I	A	I	T	L	L	R	S	V	G	E	M	G	D	W	G	Y	.	.	.	.	.	.	.	.	.	.	.	F	P	T	P	E	A	Q	C	L	G	K	H	S	L	S	Y
Template Known Secondary structure						S	S							S	S								S	S								T	.	T	T	T											S	B			T	T	S		.	.	.	.	.	.	.	.	.	.	.		B		G	G	G	G
Template Predicted Secondary structure																																	.																						.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		715	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.		.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.												.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.
		743	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	L	S	Y	T	G	T	P	T	A	A	G	V	A	Q	Q	A	R	A	W	L	T	P	V	Q	C	Y	N	K	I	P	W	D	V	M	K	L	N	K	A	G	F	N	V	P	E	S	Y	S	L	L	K	M	P	P	V	G	C	L	I	S	A	L	K	K	A	E	D	R	Q	E	V	I	L	R	L	F	N	P
Query Conservation
Alig confidence																		.												.	.	.	.	.	.	.	.
Template Conservation																		.												.	.	.	.	.	.	.	.
Template Sequence		S	F	E	S	I	T	K	Q	T	Q	F	A	S	Y	W	R	.	A	Q	E	G	Q	V	P	V	I	T	T	.	.	.	.	.	.	.	.	Q	T	N	Q	H	E	G	T	L	A	A	E	Y	S	Y	L	T	G	T	N	D	Q	V	A	L	T	A	F	K	R	R	L	A	D	N	A	L	I	T	R	S	Y	N	L
Template Known Secondary structure								T	T	T								.				T	T	S						.	.	.	.	.	.	.	.				S				S	B		S				S		B				T	T										T	T	T										S
Template Predicted Secondary structure																		.												.	.	.	.	.	.	.	.
Template SS confidence
		783	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.		.	800	.	.	.	.	.	.	.	.	.									810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.
		823	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	S	A	T	C	D	A	T	V	A	F	S	R	E	V	I	S	C	S	E	T	M	M	D	E	H	I	T	T	E	E	N	Q	G	S	N	L	S	G	P	F	L	P	G	Q	S	R	T	F	S	Y	R
Query Conservation
Alig confidence							.	.																														.	.	.	.	.
Template Conservation							.	.																														.	.	.	.	.
Template Sequence		S	N	D	K	T	.	.	C	D	F	S	L	S	L	P	N	Y	N	A	K	V	T	N	L	L	E	K	D	S	K	Q	S	T	P	S	Q	.	.	.	.	.	L	G	K	A	E	I	L	T	L	A	W	K
Template Known Secondary structure			S	S			.	.						B		T	T								T	T			B		S					S		.	.	.	.	.			T	T
Template Predicted Secondary structure							.	.																														.	.	.	.	.
Template SS confidence
		854	.	.	.	.			.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.						.	.	890	.	.	.	.	.	.	.	.	.