Return to main results Retrieve Phyre Job Id

Job DescriptionP54746
Confidence16.65%DateThu Jan 5 12:06:04 GMT 2012
Rank89Aligned Residues15
% Identity40%Templatec2k6xA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:rna polymerase sigma factor rpod; PDBTitle: autoregulation of a group 1 bacterial sigma factor involves2 the formation of a region 1.1- induced compacted structure
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   67..70.........80.
Predicted Secondary structure 


Query SS confidence 














Query Sequence  PENKDRVKKQVEAGK
Query Conservation 
     

 

  

Alig confidence 














Template Conservation        

 

  

Template Sequence  PQIERRIKKLISLGK
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 














   2930.........40...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions