Return to main results Retrieve Phyre Job Id

Job DescriptionP37758
Confidence100.00%DateThu Jan 5 11:57:30 GMT 2012
Rank1Aligned Residues420
% Identity12%Templated1pw4a_
SCOP infoMFS general substrate transporter MFS general substrate transporter Glycerol-3-phosphate transporter
Resolution3.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20.........30.........40.........50.........60.........70.........80.........90....
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Query Sequence  DWKPENPAFWENKGKHIARRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMV
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Template Sequence  HKARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYL. . VEQGFSRGDLGFALSGISIAYGFSKFIMGSVS
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S

TST..TSSTT
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   10.........20.........30.........40.........50..... ....60.........70.........80.......
 
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Query Sequence  PIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFAGANFASSMGNISFFFPKAKQGSALGINGGLGNL
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Template Sequence  DRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNV
Template Known Secondary structure  S

SSSSTTT
TTT
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   88.90.........100.........110.........120.........130.........140.........150.........160.......
 
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Query Sequence  GVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIASSRASIADQLPVLQRLHL
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Template Sequence  GGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAF. . . . . AMMRDTPQSCGLPPIEEYKNDTAKQIFMQYVLPNKLL
Template Known Secondary structure  TST

STT
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SSTTT


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   255....260.........270.........280.........290.........300.........310.........320.........330....
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Query Sequence  WLLSLLYLATFGSFIGFSAGFAMLAKTQFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLF
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Template Conservation                                                    ....................    
 
   
Template Sequence  WYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPG. . . . . . . . . . . . . . . . . . . . TLLCGWMSDK
Template Known Secondary structure  BTTBS


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   256...260.........270.........280.........290.........300..... ....310.....
 
   335....340.........350.........360.........370.........380.........390.........400.........410...
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Query Sequence  LTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAHKEAVTETAAALGFISAIGAV.
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Template Sequence  VFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLG
Template Known Secondary structure  TSTT
TTS

TT
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   316...320.........330.........340.........350.........360.........370.........380.........390.....
 
   414.....420.........430.........440.........450.........460..
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Query Sequence  GGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVYGRRKFSQK
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Template Conservation 
        
 
    
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Template Sequence  GSVAASAIVGYTVDFFG. WDGGFMVMIGGSILAVILLIVVMIGEKRRHE
Template Known Secondary structure  SS
.S
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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