 |
Job Description | P37758 | Confidence | 5.87% | Date | Thu Jan 5 11:57:30 GMT 2012 |
Rank | 32 | Aligned Residues | 71 |
% Identity | 20% | Template | d1jb0a_ |
SCOP info | Photosystem I subunits PsaA/PsaB
| Photosystem I subunits PsaA/PsaB
| Photosystem I subunits PsaA/PsaB
|
Resolution | 2.50 |
|
 |
  |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
Query Sequence |   |
Y | L | L | R | D | W | K | P | E | N | P | A | F | W | E | N | K | G | K | H | I | A | R | R | N | L | W | I | S | V | S | C | L | L | L | A | F | C | V | W | M | L | F | S | A | V | T | V | N | L | N | K | I | G | F | N | F | T | T | D | Q | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | F | L | L | T | A | L |
Query Conservation |   |
  |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|   |   |
| . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|   |   |   |   |
|   | . |   |
|
|
|   |
|
|
|   |
|
|
|
|
|
|
|
|
|
|
|
|   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|
|   |
|
|
|   |
|
|   |
|
|
|
|
|
|
|   |
|
|   |   |
Template Sequence |   |
F | M | V | R | D | Y | D | P | A | M | N | Q | . |
N | N | V | L | D | R | V | L | R | H | R | D | A | I | I | S | H | L | N | W | V | C | I | F | L | G | F | H | S | F | G | L | Y | V | H | N | D | T | M | R | A | F | G | R | P | Q | D | M | F | S | D | T | G | I | Q | L | Q | P | V | F | A | Q | W | V | Q | N | L |
Template Known Secondary structure |   |
 |  |  |  | T |
|
| G | G | G | G | S | . | S | S |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| G | G | G | S | B | S | T | T | S | B |
|
|
|
|  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
415 | . | . | . | . | 420 | . | . | . | . | . | . | |
. | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . |
  |
  |   |
79 | 80 | . | . |
Predicted Secondary structure |   |
 |  |  |  |
Query SS confidence |   |
|
|
|
|
Query Sequence |   |
P | S | V | S |
Query Conservation |   |
  |   |
|   |
Alig confidence |   |
|
|
|
|
Template Conservation |   |
  |   |
|   |
Template Sequence |   |
H | T | L | A |
Template Known Secondary structure |   |
 |  |  | T |
Template Predicted Secondary structure |   |
|
|
|
|
Template SS confidence |   |
|
|
|
|
  |   |
494 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|