Job Description P37758 Confidence 12.28% Date Thu Jan 5 11:57:30 GMT 2012 Rank 16 Aligned Residues 211 % Identity 13% Template c3hd6A_ PDB info PDB header:membrane protein, transport protein Chain: A: PDB Molecule:ammonium transporter rh type c; PDBTitle: crystal structure of the human rhesus glycoprotein rhcg Resolution 2.10 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	N	P	A	F	W	E	N	K	G	K	H	I	A	R	R	N	L	W	I	S	V	S	C	L	L	L	A	F	C	V	W	M	L	F	S	A	V	T	V	N	L	N	K	I	G	F	N	F	T	T	D	Q	L	F	L	L	T	A	L	P	S	V	S	G	A	L	L	R	V	P	Y	S	F	M	V	P	I	F
Query Conservation
Alig confidence																		.																					.	.	.	.	.	.	.	.
Template Conservation																		.																					.	.	.	.	.	.	.	.
Template Sequence		R	R	N	L	E	Q	S	K	E	R	Q	N	S	V	Y	Q	.	S	D	L	F	A	M	I	G	T	L	F	L	W	M	Y	W	P	S	F	N	.	.	.	.	.	.	.	.	S	A	I	S	Y	H	G	D	S	Q	H	R	A	A	I	N	T	Y	C	S	L	A	A	C	V	L	T	S	V	A	I	S	S	A	L
Template Known Secondary structure			T	T	G	G	G	G	T	T	T	S	S					.																				T	.	.	.	.	.	.	.	.	T	T	T		S	S																													T
Template Predicted Secondary structure																		.																					.	.	.	.	.	.	.	.
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.									.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		98	.			100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence		G	G	.	.	R	R	W	T	V	F	S	T	A	I	L	I	I	P	C	V	W	L	G	I	A	V	Q	N	P	N	T	P	F	G	I	F	I	V	I	A	L	L	C	G	F	A	G	A	N	F	A	S	S	M	G	N	I	S	F	F	F	P	K	A	K	Q	G	S	A	L	G	I	N	G	G	L	G	N	L	G
Query Conservation				.	.
Alig confidence				.	.
Template Conservation
Template Sequence		H	K	K	G	K	L	D	M	V	H	I	Q	N	A	T	L	A	G	G	V	A	V	G	T	A	A	E	M	M	L	M	P	Y	G	A	L	I	I	G	F	V	C	G	I	I	S	T	L	G	F	V	Y	L	T	P	F	L	E	S	R	L	H	I	Q	D	T	C	G	I	N	N	L	H	G	I	P	G	I	I	G
Template Known Secondary structure		S	T	T											G	G	G						T	T	T	T	T	T	T		S																																				T	T						T
Template Predicted Secondary structure
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
		176	.	.	.	180	.									.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.
Query Sequence		V	S	V	M	Q	L	.	.	.	.	.	.	.	.	V	A	P	L	V	I	F	V	P	V	F	A	F	L	G	V	N	G	V	P	Q	A	D	G	S	V	M	S	L	A	N	A	A	W	I	W	V	P	L	L	A	I	A	T	I	A	A	W	S	G	M	N	D	I	A	S
Query Conservation								.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	I	V	G	A	V	T	A	A	S	D	W	T	A	R	T	Q	G	K	F	Q	I	Y	G	L	L	V	T	L	A	M	A	L	M	G	G	I	I	V	G	L	I	L	R	L	P	F	W	G	Q	P	S	D	E	N	C	F	E	D	A	V	Y	W	E	M	P	E	G	N	S
Template Known Secondary structure																																													T	S	T	T	S					T	T	S	T	T		G	G	G	T	S				T	T	T
Template Predicted Secondary structure
Template SS confidence
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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