Return to main results Retrieve Phyre Job Id

Job DescriptionP13024
Confidence37.13%DateThu Jan 5 11:33:27 GMT 2012
Rank217Aligned Residues53
% Identity17%Templated1g25a_
SCOP infoRING/U-box RING/U-box RING finger domain, C3HC4
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   189190..... ....200.........210.........220... ......230... ......240.....
Predicted Secondary structure 






....
















.









...






Query SS confidence 






. . . .



























.









. . .











Query Sequence  YCPVCGS. . . . MPVSSMVQIGTTQGLRYLHCNLCETEWH. VVRVKCSNCE. . . QSGKLHYWSLDD
Query Conservation   





.... 
  
 
      
 
 
 

 
 
 
 .  
  

 

...          
 
Alig confidence 






....







....















.









...











Template Conservation   



              ....  
 
 

  

          

 

             

Template Sequence  GCPRCKTTKYRNPSLKLMV. . . . NVCGHTLCESCVDLLFVRGAGNCPECGTPLRKSNFRVQLFED
Template Known Secondary structure 

STTTT
SS

....
TT


TTSSS
TTT



SS






Template Predicted Secondary structure 









....
























Template SS confidence 
































































   5....10.........20... ......30.........40.........50.........60.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions