Return to main results Retrieve Phyre Job Id

Job DescriptionP13024
Confidence81.81%DateThu Jan 5 11:33:27 GMT 2012
Rank23Aligned Residues36
% Identity25%Templatec3gn5B_
PDB info PDB header:dna binding proteinChain: B: PDB Molecule:hth-type transcriptional regulator mqsa (ygit/b3021); PDBTitle: structure of the e. coli protein mqsa (ygit/b3021)
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   227..230...... ...240......... 250.........260..
Predicted Secondary structure 









.....







...




Query SS confidence 









. . . . .












. . .












Query Sequence  VKCSNCEQSG. . . . . KLHYWSLDDEQAA. . . IKAESCDDCDTYL
Query Conservation    

 

   .....       
     ... 


 
  
  

Alig confidence 









.....












...












Template Conservation 



 

               

    
       
  


  
Template Sequence  MKCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESI
Template Known Secondary structure 
B
TTTSSSBTTTTT

Template Predicted Secondary structure 



















Template SS confidence 











































   1........10.........20.........30.........40....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions