Return to main results Retrieve Phyre Job Id

Job DescriptionP13024
Confidence45.04%DateThu Jan 5 11:33:27 GMT 2012
Rank155Aligned Residues27
% Identity7%Templatec2nn6I_
PDB info PDB header:hydrolase/transferaseChain: I: PDB Molecule:3'-5' exoribonuclease csl4 homolog; PDBTitle: structure of the human rna exosome composed of rrp41, rrp45,2 rrp46, rrp43, mtr3, rrp42, csl4, rrp4, and rrp40
Resolution3.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   214.....220.. .......230.........240
Predicted Secondary structure 







..















Query SS confidence 








. .

















Query Sequence  HCNLCETEW. . HVVRVKCSNCEQSGKLHY
Query Conservation   

 
 
 
..   
  

 

       
Alig confidence 








..

















Template Conservation   
             
 
  

  
 


Template Sequence  HSESGIQMVPISWCEMQCPKTHTKEFRKV
Template Known Secondary structure  B
SSS
B
TT
TTTT

B



Template Predicted Secondary structure 

















Template SS confidence 




























   157..160.........170.........180.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions