 |
Job Description | P13024 | Confidence | 28.87% | Date | Thu Jan 5 11:33:27 GMT 2012 |
Rank | 265 | Aligned Residues | 61 |
% Identity | 10% | Template | c2i7fB_ |
PDB info |
PDB header:oxidoreductase | Chain: B: PDB Molecule:ferredoxin component of dioxygenase; |
PDBTitle: sphingomonas yanoikuyae b1 ferredoxin
|
Resolution | 1.90 Å |
|
 |
  |   |
188 | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | Y | C | P | V | C | G | S | M | P | V | S | S | M | V | Q | I | G | T | T | Q | G | L | R | Y | L | H | C | N | L | C | E | T | E | W | H | V | V | R | V | K | C | S | N | C | E | Q | S | G | K | L | H | Y | W | S | L | D | D | E | Q | A | A | I | K | A | E | S |
Query Conservation |   |
|   |
|
|
|
|
|
|   |
|   |   |
|   |
|   |   |   |   |   |   |
|   |
|   |
|   |
|
|   |
|   |
|   |
|   |   |   |
|   |   |
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|   |
|   |   | . | . | . | . | . | . |
|   |   |
|   |   |   |   |   |   |
|   |
|
|   |
|
|   |   |
|
|
|   |
|
|   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |
|   |   |   |   |
|   |
|   |
|   |
|
Template Sequence |   |
N | L | C | T | H | G | N | A | M | . |
. |
. |
. |
. |
. |
L | T | D | G | Y | Q | D | G | T | I | I | E | C | P | F | H | G | G | S | F | D | I | A | T | G | A | A | K | A | F | P | C | Q | I | P | I | K | T | Y | P | V | T | I | E | D | G | W | V | C | I | D | Q |
Template Known Secondary structure |   |
S | B |
| S | S | S | S |
| B | . | . | . | . | . | . | G | G | G | S |  |  |  | T | T |  |  |  |
| S | S | T | T |
|  |  |  | T | T | T |
|
| B |
| S | T | T |
|
| S |
|
|
|  |  |
|
|  |  |  | T | T |  |  |  |  |
|
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  | . | . | . | . | . | . |  |  |
|
|  |  |
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
43 | . | . | . | . | . | . | 50 | . | |
|
|
|
|
|
. | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|