Return to main results Retrieve Phyre Job Id

Job DescriptionP13024
Confidence96.88%DateThu Jan 5 11:33:27 GMT 2012
Rank2Aligned Residues72
% Identity15%Templatec1i3qI_
PDB info PDB header:transcriptionChain: I: PDB Molecule:dna-directed rna polymerase ii 14.2kd PDBTitle: rna polymerase ii crystal form i at 3.1 a resolution
Resolution3.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   189190.........200.........210.........220.... .....230......
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Query Sequence  YCPVCGSMPVSSMVQIGTTQGLRYLHCNLCETEWHV. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . VRVKCSNCEQSG
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Template Sequence  FCRDCNN. . . MLYPREDKENNRLLFECRTCSYVEEAGSPLVYRHELITNIGETAGVVQDIGSDPTLPRSDRECPKCHSRE
Template Known Secondary structure  B
SSS

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   6...10.. .......20.........30.........40.........50.........60.........70.........80..
 
   237 ..240.........250.........260...
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Query Sequence  K. . LHYWSLDDEQAAIKAESCDDCDTYLK
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Template Sequence  NVFFQSQQRRKDTSMVLFFVCLSCSHIFT
Template Known Secondary structure  B


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   83......90.........100.........110.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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