Phyre 2 alignment of P76085 with d1v25a

Job Description P76085
Confidence 100.00% Date Thu Jan 5 12:18:37 GMT 2012

Rank 22 Aligned Residues 304

% Identity 18% Template d1v25a_

SCOP info Acetyl-CoA synthetase-like Acetyl-CoA synthetase-like Acetyl-CoA synthetase-like

Resolution 2.30

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	P	F	D	T	F	A	V	P	M	E	Q	V	V	R	I	H	A	S	S	G	T	T	G	K	P	T	V	V	G	Y	T	Q	N	D	I	D	N	W	A	N	I	V	A	R	S	L	R	A	A	G	G	S	P	K	D	K	I	H	V	A	Y	G	Y	G	L	F	T	G	G	L	G	A	H	Y	G	A	E	R	L	G
Query Conservation
Alig confidence																																				.
Template Conservation																																				.
Template Sequence	E	A	D	P	V	R	V	P	E	R	A	A	C	G	M	A	Y	T	T	G	T	T	G	L	P	K	G	V	V	Y	S	H	R	A	L	.	V	L	H	S	L	A	A	S	L	V	D	G	T	A	L	S	E	K	D	V	V	L	P	V	V	P	M	F	H	V	N	A	W	C	L	P	Y	A	A	T	L	V	G	A
Template Known Secondary structure									T	T	S									S	S	S	S	S												.							T	T	S	T	T	T	T				T	T							S		T	T	S					T									T
Template Predicted Secondary structure																																				.
Template SS confidence
	167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.

	156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	A	T	V	I	P	M	S	G	G	Q	T	E	K	Q	A	Q	L	I	R	D	F	Q	P	D	M	I	M	V	T	P	S	Y	C	L	N	L	I	E	E	L	E	R	Q	L	G	G	D	A	S	G	C	S	L	R	V	G	V	F	G	A	E	P	W	T	Q	A	M	R	K	E	I	E	R	R	L	G	I	T	A	L
Query Conservation
Alig confidence																																															.	.	.																										.
Template Conservation																																															.	.	.																										.
Template Sequence	K	Q	V	L	P	G	P	R	L	D	P	A	S	L	V	E	L	F	D	G	E	G	V	T	F	T	A	G	V	P	T	V	W	L	A	L	A	D	Y	L	E	S	T	G	H	R	.	.	.	L	K	T	L	R	R	L	V	V	G	G	S	A	A	P	R	S	L	I	A	R	F	E	R	M	.	G	V	E	V	R
Template Known Secondary structure						T	T			S											T	T																						T			.	.	.		S	S								S	S													T	.	T
Template Predicted Secondary structure																																															.	.	.																										.
Template SS confidence
	246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.				.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.		.	.	.	320	.

	236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.													.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.		.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.																						.																								.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.																						.																								.	.
Query Sequence	D	I	Y	G	L	S	E	V	M	G	P	G	V	A	M	E	C	L	E	T	T	.	.	.	.	.	.	.	.	.	.	.	.	D	G	P	T	I	W	E	D	H	F	Y	P	E	I	V	N	P	H	D	G	T	.	P	L	A	D	G	E	H	G	E	L	L	F	T	T	L	T	K	E	A	L	P	V	I	.	.
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.																						.																								.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.																						.																								.	.
Template Conservation
Template Sequence	Q	G	Y	G	L	T	E	T	S	P	V	V	V	Q	N	F	V	K	S	H	L	E	S	L	S	E	E	E	K	L	T	L	K	A	K	T	G	L	P	I	P	L	V	R	L	R	V	A	D	E	E	G	R	P	V	P	K	D	G	K	A	L	G	E	V	Q	L	K	G	P	W	I	T	G	G	Y	Y	G	N	E
Template Known Secondary structure						G	G	G	S	S									G	G	G	T	T	S										T	S		B				T	T								T	T	S		B			S	S	S										S	T	T	S		S	S		B	T
Template Predicted Secondary structure
Template SS confidence
	322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.

												301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	.	.	.	.	.	.	.	.	.	.	.	R	Y	R	T	R	D	L	T	R	L	L	P	G	T	A	R	T	M	R	R	M	D	R	I	S	G	R	S	D	D	M	L	I	I	R	G	V	N	V	F	P	S	Q	L	E	E	E	I	V	K	F	E	H	L	S	P	H	Y	Q	L	E	V	N	R	R	G	H	L	D
Query Conservation	.	.	.	.	.	.	.	.	.	.	.
Alig confidence	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.
Template Sequence	E	A	T	R	S	A	L	T	P	D	G	F	F	R	T	G	D	I	A	V	W	D	E	E	G	.	.	.	.	.	.	Y	V	E	I	K	D	R	L	K	D	L	I	K	S	G	G	E	W	I	S	S	V	D	L	E	.	.	.	.	.	.	.	.	.	.	N	A	A	V	V	A	I	P	H	P	K	W	Q	E
Template Known Secondary structure					T	T	B		T	T	S												T	T		.	.	.	.	.	.								S	S						T	T										.	.	.	.	.	.	.	.	.	.										S	S	S	S
Template Predicted Secondary structure																										.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.
Template SS confidence
	402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.							.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.											.	.	.	.	.	.	.	.	460	.	.	.	.	.

	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	S	L	S	V	K	V	E	L	K	E	S	S	L	T	L	T	H	E	Q	R	C	Q	V	C	H	Q	L	R	H	R	I	K	S	M	V	G
Query Conservation
Alig confidence																		.	.	.	.	.
Template Conservation																		.	.	.	.	.
Template Sequence	R	P	L	A	V	V	G	F	A	K	W	Q	L	P	D	A	Y	.	.	.	.	.	L	K	R	A	L	R	E	Q	Y	K	N	Y	Y	G
Template Known Secondary structure										T	T	T	S		S	B		.	.	.	.	.			T	T					S	T	T	S	S
Template Predicted Secondary structure																		.	.	.	.	.
Template SS confidence
	476	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.						.	.	.	.	.	.	.	500	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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