Return to main results Retrieve Phyre Job Id

Job DescriptionP76085
Confidence100.00%DateThu Jan 5 12:18:37 GMT 2012
Rank12Aligned Residues339
% Identity16%Templated1mdba_
SCOP infoAcetyl-CoA synthetase-like Acetyl-CoA synthetase-like Acetyl-CoA synthetase-like
Resolution2.15

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   76...80.........90.........100.........110.........120.........130.........140....... ..150....
Predicted Secondary structure 


























.
Query SS confidence 







































































.






Query Sequence  PFDTFAVPMEQVVRIHASSGTTGKPTVVGYTQNDIDNWANIVARSLRAAGGSPKDKIHVAYGYGLFTGGLGA. HYGAERL
Query Conservation                
  





 

 
  
   
                   
                 .       
Alig confidence 














































...





















.






Template Conservation                
  





 

                     ...                           
  
Template Sequence  PVKLPEVKSSDVAFLQLSGGSTGLSKLIPRTHDDYIYSLKRSVEVCW. . . LDHSTVYLAALPMAHNYPLSSPGVLGVLYA
Template Known Secondary structure 







TTS


SSSS

T...

TT

S
TTSSST
Template Predicted Secondary structure 

























...




















Template SS confidence 















































































   173......180.........190.........200.........210......... 220.........230.........240.........
 
   155....160.........170.........180.........190.........200.........210.........220.........230....
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  GATVIPMSGGQTEKQAQLIRDFQPDMIMVTPSYCLNLIEELERQLGGDASGCSLRVGVFGAEPWTQAMRKEIERRLGITA
Query Conservation 
                 
     
 
   

    
                
  
   
                  
Alig confidence 














































...





























Template Conservation                                       
         ...                             
Template Sequence  GGRVVLSPSPSPDDAFPLIEREKVTITALVPPLAMVWMDAASSRRDD. . . LSSLQVLQVGGAKFSAEAARRVKAVFGCTL
Template Known Secondary structure  T

SSSST
S




...
TT

SS


TTT
S
Template Predicted Secondary structure 














...













Template SS confidence 















































































   250.........260.........270.........280.........290...... ...300.........310.........320......
 
   235....240.........250....... ..260.........270.........280.........290.........300.
Predicted Secondary structure 









..





























...........
Query SS confidence 






















. .











































. . . . . . . . . . .
Query Sequence  LDIYGLSEVMGPGVAMECLETTD. . GPTIWEDHFYPEIVNPHDGTPLADGEHGELLFTTLTKEALPVIR. . . . . . . . . . .
Query Conservation     

 

 
             ..            


         
  


 

       
  
...........
Alig confidence 






















..











































...........
Template Conservation     

 

                   
 
                      


   
     

      
       
Template Sequence  QQVFGMAEGLVNYTRLDDPEEIIVNTQGKPMSPYDESRVWDDHDRDVKPGETGHLLTRGPYTIRGYYKAEEHNAASFTED
Template Known Secondary structure 
TTS


TTS



SSTT

TTS
B

TT


TTS
SS
TT
B
TT
Template Predicted Secondary structure 























































Template SS confidence 















































































   327..330.........340.........350.........360.........370.........380.........390.........400......
 
   302.......310.........320.........330.........340.........350.........360.........370.........
Predicted Secondary structure  ..





























Query SS confidence  . .













































































Query Sequence  . . YRTRDLTRLLPGTARTMRRMDRISGRSDDMLIIRGVNVFPSQLEEEIVKFEHLSPHYQLEVNRRGHLDSLSVKVELKE
Query Conservation  ..
 


       
           

        
  
 
  

  
     
    

              
    
Alig confidence  ..












......


























































Template Conservation       

       
...... 
   

  
 
   
  
 
 


  
   
 
    
             
 
    
Template Sequence  GFYRTGDIVRLTRDG. . . . . . YIVVEGRAKDQINRGGEKVAAEEVENHLLAHPAVHDAAMVSMPDQFLGERSCVFIIPRD
Template Known Secondary structure  S

TTS......
GGG

SS

TTSTTTTTSS
Template Predicted Secondary structure 














......


















Template SS confidence 















































































   407..410.........420. ........430.........440.........450.........460.........470.........480
 
   380.........390......... 400.........410.........420. ........430.....
Predicted Secondary structure 




.












.


Query SS confidence 



















.





















.













Query Sequence  SSLTLTHEQRCQVCHQLRHR. IKSMVGISTDVMIVNCGSIPRS. EGKACRVFDLRNIV
Query Conservation              
   
   .
         
  
    



.


  
 

 
   
Alig confidence 




.....









.







...










.






.





Template Conservation       .....  
   
    
     
 ... 
  
  

 
  


 
 . 
    
Template Sequence  EAPKA. . . . . AELKAFLRERGLAAYKIPD. . . RVEFVESFPQTGVGKVSKK. ALREAI
Template Known Secondary structure  S


.....TT

GGGS
S...
SS

B
TTS
B
.
Template Predicted Secondary structure 



.....







...












.
Template SS confidence 

























































   481.... ....490.........500.... .....510.........520... ......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions