Job Description P76085 Confidence 100.00% Date Thu Jan 5 12:18:37 GMT 2012 Rank 14 Aligned Residues 340 % Identity 17% Template c3ni2A_ PDB info PDB header:ligase Chain: A: PDB Molecule:4-coumarate:coa ligase; PDBTitle: crystal structures and enzymatic mechanisms of a populus tomentosa 4-2 coumarate:coa ligase Resolution 1.90 Å

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		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																																																	.
Query SS confidence																																																	.
Query Sequence		P	F	D	T	F	A	V	P	M	E	Q	V	V	R	I	H	A	S	S	G	T	T	G	K	P	T	V	V	G	Y	T	Q	N	D	I	D	N	W	A	N	I	V	A	R	S	L	R	.	A	A	G	G	S	P	K	D	K	I	H	V	A	Y	G	Y	G	L	F	T	G	G	L	G	A	H	Y	G	A	E	R	L
Query Conservation																																																	.
Alig confidence																																																	.
Template Conservation
Template Sequence		E	A	P	Q	V	D	I	S	P	D	D	V	V	A	L	P	Y	S	S	G	T	T	G	L	P	K	G	V	M	L	T	H	K	G	L	I	T	S	V	A	Q	Q	V	D	G	D	N	P	N	L	Y	F	H	S	E	D	V	I	L	C	V	L	P	M	F	H	I	Y	A	L	N	S	I	M	L	C	G	L	R	V
Template Known Secondary structure		G								T	T	S									T	T	S	S	S																					S	S	S		S	S				T	T							S		T	T	S							T
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230		.	.	.
Predicted Secondary structure																																																																														.
Query SS confidence																																																																														.
Query Sequence		G	A	T	V	I	P	M	S	G	G	Q	T	E	K	Q	A	Q	L	I	R	D	F	Q	P	D	M	I	M	V	T	P	S	Y	C	L	N	L	I	E	E	L	E	R	Q	L	G	G	D	A	S	G	C	S	L	R	V	G	V	F	G	A	E	P	W	T	Q	A	M	R	K	E	I	E	R	R	L	.	G	I	T
Query Conservation																																																																														.
Alig confidence																																																	.	.	.																											.
Template Conservation																																																	.	.	.
Template Sequence		G	A	P	I	L	I	M	P	K	F	E	I	G	S	L	L	G	L	I	E	K	Y	K	V	S	I	A	P	V	V	P	P	V	M	M	S	I	A	K	S	P	D	L	D	K	H	D	.	.	.	L	S	S	L	R	M	I	K	S	G	G	A	P	L	G	K	E	L	E	D	T	V	R	A	K	F	P	Q	A	R
Template Known Secondary structure		T							S	S														T																T		S		G	G	G	S		.	.	.		T	T								S	S															T	T	S
Template Predicted Secondary structure																																																	.	.	.
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.				.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250							.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure																			.	.	.	.	.	.																																																			.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.																																																			.	.	.	.	.	.	.
Query Sequence		A	L	D	I	Y	G	L	S	E	V	M	G	P	G	V	A	M	.	.	.	.	.	.	E	C	L	E	T	T	D	G	P	T	I	W	E	D	H	F	Y	P	E	I	V	N	P	H	D	G	T	P	L	A	D	G	E	H	G	E	L	L	F	T	T	L	T	K	E	A	L	P	V	I	.	.	.	.	.	.	.
Query Conservation																			.	.	.	.	.	.																																																			.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.																																																			.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	G	Q	G	Y	G	M	T	E	A	G	P	V	L	A	M	C	L	A	F	A	K	E	P	F	D	I	K	P	G	A	C	G	T	V	V	R	N	A	E	M	K	I	V	D	P	E	T	G	A	S	L	P	R	N	Q	P	G	E	I	C	I	R	G	D	Q	I	M	K	G	Y	L	N	D	P	E	A	T	S	R
Template Known Secondary structure									G	G	G	S	S						G	G	G	S	S	S						T	T							S	S								T	T	T			B			T	T									S	T	T	S		S			T	T
Template Predicted Secondary structure
Template SS confidence
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
								301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	R	Y	R	T	R	D	L	T	R	L	L	P	G	T	A	R	T	M	R	R	M	D	R	I	S	G	R	S	D	D	M	L	I	I	R	G	V	N	V	F	P	S	Q	L	E	E	E	I	V	K	F	E	H	L	S	P	H	Y	Q	L	E	V	N	R	R	G	H	L	D	S	L	S	V	K
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.															.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.
Template Sequence		T	I	D	K	E	G	W	L	H	T	G	D	I	G	Y	I	D	D	D	D	.	.	.	.	.	.	E	L	F	I	V	D	R	L	K	E	L	I	K	Y	K	G	F	Q	V	A	P	A	E	L	E	A	L	L	I	A	H	P	E	I	S	D	A	A	V	V	G	L	K	D	E	D	A	G	E	V	P	V	A	F
Template Known Secondary structure			B		T	T	S												T	T	S	.	.	.	.	.	.									S						T	T														T	S	T	T												T	T	T
Template Predicted Secondary structure																						.	.	.	.	.	.
Template SS confidence
		406	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.							.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.
		375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.		.	.	.	.	.	.	.	.	430	.	.
Predicted Secondary structure																																																	.
Query SS confidence																																																	.
Query Sequence		V	E	L	K	E	S	S	L	T	L	T	H	E	Q	R	C	Q	V	C	H	Q	L	R	H	R	I	K	S	M	V	G	I	S	T	D	V	M	I	V	N	C	G	S	I	P	R	S	.	E	G	K	A	C	R	V	F	D	L	R
Query Conservation																																																	.
Alig confidence																.	.	.	.																.	.	.												.								.
Template Conservation																.	.	.	.																.	.	.																				.
Template Sequence		V	V	K	S	E	K	S	Q	A	T	E	D	E	I	.	.	.	.	K	Q	Y	I	S	K	Q	V	I	F	Y	K	R	I	K	.	.	.	R	V	F	F	I	E	A	I	P	K	A	P	S	G	K	I	L	R	K	.	N	L	K
Template Known Secondary structure						T	T									.	.	.	.						T	T	S		G	G	G			S	.	.	.						S				B		T	T	S		B				.
Template Predicted Secondary structure																.	.	.	.																.	.	.																				.
Template SS confidence
		480	.	.	.	.	.	.	.	.	.	490	.	.	.					.	.	.	.	.	.	500	.	.	.	.	.	.	.	.				.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.		.	.	530

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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