Job Description P76085 Confidence 100.00% Date Thu Jan 5 12:18:37 GMT 2012 Rank 15 Aligned Residues 353 % Identity 13% Template c3kxwA_ PDB info PDB header:ligase Chain: A: PDB Molecule:saframycin mx1 synthetase b; PDBTitle: the crystal structure of fatty acid amp ligase from legionella2 pneumophila Resolution 1.85 Å

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		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	F	D	T	F	A	V	P	M	E	Q	V	V	R	I	H	A	S	S	G	T	T	G	K	P	T	V	V	G	Y	T	Q	N	D	I	D	N	W	A	N	I	V	A	R	S	L	R	A	A	G	G	S	P	K	D	K	I	H	V	A	Y	G	Y	G	L	F	T	G	G	L	G	A	H	Y	G	A	E	R	L	G
Query Conservation
Alig confidence																																																	.	.	.
Template Conservation																																																	.	.	.
Template Sequence		S	W	Q	P	T	S	I	K	S	N	D	I	A	F	L	Q	Y	T	S	G	S	T	X	H	P	K	G	V	X	V	S	H	H	N	L	L	D	N	L	N	K	I	F	T	S	F	H	.	.	.	X	N	D	E	T	I	I	F	S	W	L	P	P	H	H	D	X	G	L	I	G	C	I	L	T	P	I	Y	G	G
Template Known Secondary structure		G								T	T	S								S	S		S	S	S																						T	T	.	.	.			T	T							S		T	T	S						T	T	T							T
Template Predicted Secondary structure																																																	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.				.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		156	.	.	.	160	.	.	.	.					.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure											.	.	.	.																																																																			.
Query SS confidence											.	.	.	.																																																																			.
Query Sequence		A	T	V	I	P	M	S	G	G	.	.	.	.	Q	T	E	K	Q	A	Q	L	I	R	D	F	Q	P	D	M	I	M	V	T	P	S	Y	C	L	N	L	I	E	E	L	E	R	Q	L	G	G	D	A	S	G	C	S	L	R	V	G	V	F	G	A	E	P	W	T	Q	A	M	R	K	E	I	E	R	R	L	.
Query Conservation											.	.	.	.																																																																			.
Alig confidence											.	.	.	.																																																																			.
Template Conservation
Template Sequence		I	Q	A	I	X	X	S	P	F	S	F	L	Q	N	P	L	S	W	L	K	H	I	T	K	Y	K	A	T	I	S	G	S	P	N	F	A	Y	D	Y	C	V	K	R	I	R	E	E	K	K	E	G	L	D	L	S	S	W	V	T	A	F	N	G	A	E	P	V	R	E	E	T	X	E	H	F	Y	Q	A	F	K
Template Known Secondary structure																T											T		S						T												G	G	G	G	T	T				T	T								S	S															G
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
							231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.																											260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	G	I	T	A	L	D	I	Y	G	L	S	E	V	M	G	P	G	V	A	M	E	C	L	E	T	T	D	G	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	I	W	E	D	H	F	Y	P	E	I	V	N	P	H	D	G	T	P	L
Query Conservation		.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	F	G	F	R	K	E	A	F	Y	P	C	Y	G	L	A	E	A	T	L	L	V	T	G	G	T	P	G	S	S	Y	K	T	L	T	L	A	K	E	Q	F	Q	D	H	R	V	H	F	A	D	D	N	S	P	G	S	Y	K	L	V	S	S	G	N	P	I	Q	E	V	K	I	I	D	P	D	T	L	I	P	C
Template Known Secondary structure		G	G	T			G	G	G								G	G	G	S	S							T	T	S									S				S	S	S	B			B			T	T		T	T											S	S							T	T	T			B
Template Predicted Secondary structure
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.												.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	D	G	E	H	G	E	L	L	F	T	T	L	T	K	E	A	L	P	V	I	R	Y	R	.	.	.	.	.	.	.	.	.	.	.	T	R	D	L	T	R	L	L	P	G	T	A	R	T	M	R	R	M	D	R	I	S	G	R	S	D	D	M	L	I	I	R	G	V	N	V	F	P	S	Q	L	E	E	E	I
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	F	D	Q	V	G	E	I	W	V	Q	S	N	S	V	A	K	G	Y	W	N	Q	P	E	E	T	R	H	A	F	A	G	K	I	K	D	D	A	I	Y	L	R	T	G	D	L	G	F	L	H	E	N	E	L	Y	V	T	G	R	I	K	D	L	I	I	I	Y	G	K	N	H	Y	P	Q	D	I	E	F	S	L
Template Known Secondary structure			T	T	B								S	T	T	S				B	T	T											B			T	T				B											T	T								S	S									T	T
Template Predicted Secondary structure
Template SS confidence
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.
		349	350	.	.	.				.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.		.	.	410	.	.	.	.	.	.	.	.	.	420	.		.	.
Predicted Secondary structure							.	.	.																																																							.															.
Query SS confidence							.	.	.																																																							.															.
Query Sequence		V	K	F	E	H	.	.	.	L	S	P	H	Y	Q	L	E	V	N	R	R	G	H	L	D	S	L	S	V	K	V	E	L	K	E	S	S	L	T	L	T	H	E	Q	R	C	Q	V	C	H	Q	L	R	H	R	I	K	S	M	V	G	I	S	.	T	D	V	M	I	V	N	C	G	S	I	P	R	S	.	E	G
Query Conservation							.	.	.																																																							.															.
Alig confidence							.	.	.																														.	.	.																							.															.
Template Conservation																																							.	.	.
Template Sequence		X	H	S	P	L	H	H	V	L	G	K	C	A	A	F	V	I	Q	E	E	H	E	Y	K	L	T	V	X	C	E	V	K	N	R	F	X	D	.	.	.	D	V	A	Q	D	N	L	F	N	E	I	F	E	L	V	Y	E	N	H	Q	L	E	V	H	T	I	V	L	I	P	L	K	A	X	P	H	T	T	S	G
Template Known Secondary structure				S	G	G	G	G	G												T	T											S		T	T			.	.	.																				S											T	T		S				S
Template Predicted Secondary structure																																							.	.	.
Template SS confidence
		476	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.				.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.
		424	.	.	.	.	.	430	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	C	R	V	F	D	L	R	N	I	V
Query Conservation
Alig confidence							.
Template Conservation							.
Template Sequence		K	I	R	R	N	.	F	C	R	K	H	L
Template Known Secondary structure							.
Template Predicted Secondary structure							.
Template SS confidence
		553	.	.	.	.		.	.	560	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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