|   |
76 | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | |
|
|
|
|
. | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | F | D | T | F | A | V | P | M | E | Q | V | V | R | I | H | A | S | S | G | T | T | G | K | P | T | V | V | G | Y | T | Q | N | D | I | D | N | W | A | N | I | V | A | R | S | L | . |
. |
. |
. |
. |
R | A | A | G | G | S | P | K | D | K | I | H | V | A | Y | G | Y | G | L | F | T | G | G | L | G | A | H | Y | G |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|
|
|
|   |
|
|   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|
|
|
|
| . | . |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
S | D | I | L | N | N | Y | P | E | N | L | D | A | Y | L | L | Y | T | S | G | G | T | . |
. |
P | K | G | V | R | V | S | R | H | N | L | S | S | F | S | D | A | W | G | K | L | I | G | N | V | A | P | K | S | L | E | L | G | G | V | G | K | F | L | C | L | A | S | R | A | F | D | V | H | I | G | E | X | F | L | A |
Template Known Secondary structure |   |
S |
|
|
|
|
|
|
| T | T | S |  |  |  |  |  |  |  |
|
|
|
| . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| G | G | G | G | G |
| T | T | T |
|  |  |  |
|
| S |
| T | T | S | T |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
| . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
161 | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | |
|
. | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . |
  |
  |   |
151 | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 |
Predicted Secondary structure |   |
 |  |  |  |
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | E | R | L | G | A | T | V | I | P | M | S | G | G | Q | T | E | K | Q | A | Q | L | I | R | D | F | Q | P | D | M | I | M | V | T | P | S | Y | C | L | N | L | I | E | E | L | E | R | Q | L | G | G | D | A | S | G | C | S | L | R | V | G | V | F | G | A | E | P | W | T | Q | A | M | R | K | E | I | E | R | R | L |
Query Conservation |   |
  |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |
|   |   |   |
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
W | R | F | G | L | C | A | V | T | G | E | R | L | S | X | L | D | D | L | P | R | T | F | R | E | L | G | V | T | H | A | G | I | V | P | S | L | L | D | Q | T | G | . |
. |
. |
. |
. |
. |
. |
L | V | P | E | D | A | P | H | L | V | Y | L | G | V | G | G | E | K | X | T | P | R | T | Q | Q | I | W | S | S | S | D |
Template Known Secondary structure |   |
 |  | T | T |
|  |  |  |  |
|
|  |  |  |  |  |  | T |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |
|  |  |  |  |  |  |  | T | . | . | . | . | . | . | . |
|
| G | G | G | S | T | T |
|
|  |  |  |  |  | S | S |
|
|
|  |  |  |  |  |  |  | T | T |
| S |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
241 | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . |
  |
  |   |
231 | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | |
|
. | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | |
|
|
|
|
|
|
Predicted Secondary structure |   |
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
Query Sequence |   |
G | I | T | A | L | D | I | Y | G | L | S | E | V | M | G | P | G | V | A | M | E | C | L | E | T | T | . |
. |
D | G | P | T | I | W | E | D | H | F | Y | P | E | I | V | N | P | H | D | G | T | P | L | A | D | G | E | H | G | E | L | L | F | T | T | L | T | K | E | A | L | P | V | I | R | . |
. |
. |
. |
. |
. |
. |
Query Conservation |   |
  |   |   |
|   |   |   |
|
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|   |
|
|   |   |   |   |   |   |   |
|   |   |
| . | . | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
Template Conservation |   |
  |   |   |
|   |   |   |
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
Template Sequence |   |
R | V | A | L | V | N | V | Y | G | P | T | E | V | T | I | G | C | S | A | G | R | I | L | P | D | S | D | T | R | C | I | G | H | P | L | G | D | S | V | A | H | V | L | A | P | G | S | N | E | H | V | K | K | G | X | A | G | E | L | V | I | E | G | S | L | V | A | N | G | Y | L | N | R | P | D | A | K | G | F | C |
Template Known Secondary structure |   |
S |
|  |  |  |  |  |  |
|
| G | G | G |
| S |
| S |  |  |  |  |
|
| T | T | S |
| T | T |  |  |  |  |  |
| T | T |
|  |  |  |  |  |
| T | T | S | S |
| B |
|
| T | T | S |  |  |  |  |  |  |  | S | T | T | S |
| S |  |  | S | S |
| T | T |
|
|
|  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
314 | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . |
  |
  |   |
|
|
|
|
|
|
|
302 | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . |
Predicted Secondary structure |   |
. | . | . | . | . | . | . |
|
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|  |  |  |
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
Y | R | T | R | D | L | T | R | L | L | P | G | T | A | R | T | M | R | R | M | D | R | I | S | G | R | S | D | D | M | L | I | I | R | G | V | N | V | F | P | S | Q | L | E | E | E | I | V | K | F | E | H | L | S | P | H | Y | Q | L | E | V | N | R | R | G | H | L | D | S | L | S | V | K |
Query Conservation |   |
. | . | . | . | . | . | . |
|   |
|
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |
|
|   |   |
|   |   |   |   |   |
|   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
. | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |   |   |
| . | . | . | . | . | . |   |
|   |   |   |
|
|   |   |
|   |
| . | . | . |   |   |   |
|   |   |   |
|
|
|   |   |
|   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
D | I | N | G | R | K | X | Y | R | T | G | D | I | V | R | X | D | A | D | S | . |
. |
. |
. |
. |
. |
S | I | L | F | L | G | R | K | D | E | Q | V | . |
. |
. |
K | Q | R | L | E | L | G | E | V | S | E | V | I | R | S | L | S | P | T | D | I | D | V | V | T | L | L | L | F | L | V | S | F | V | A | S | S | G | A |
Template Known Secondary structure |   |
 |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T | S | . | . | . | . | . | . |
|  |  |  |  |  |  |
|
|
|
|
| . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
| S | S |
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  | T | T |
|
Template Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . |
|  |  |  |  |  |
|
|
|
|
|
| . | . | . |
|  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
394 | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | |
|
|
|
|
|
. | . | . | . | . | . | 420 | . | . | . | . | . | |
|
|
. | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . |
  |
  |   |
375 | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | |
420 | . | |
. | . | . | . | . | . | . | . | 430 | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
| . |
|
| . |
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | E | L | K | E | S | S | L | T | L | T | H | E | Q | R | C | Q | V | C | H | Q | L | R | H | R | I | K | S | M | V | G | I | S | T | D | V | M | I | V | N | C | G | S | I | P | . |
R | S | . |
E | G | K | A | C | R | V | F | D | L | R | N |
Query Conservation |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|
| . |
|
| . |
|
|
|   |   |
|   |
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
| . |
|
| . |
|
|
|
|
|
|
| . |
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |   |   | . | . |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |
|   | . | . | . |   |
|   |   |
|   |   |
|
|   |   |
|   |   |
|
|
|   |
|   | . |   |
|
|   |
Template Sequence |   |
A | V | R | G | E | L | R | N | . |
. |
Y | K | E | I | N | N | S | L | R | Q | A | C | E | Q | T | L | P | A | Y | X | V | P | D | . |
. |
. |
F | I | I | P | I | S | F | I | P | L | R | D | T | S | A | K | T | D | A | K | . |
A | L | E | H |
Template Known Secondary structure |   |
|
|
| S |
|
|
|
| . | . |
| T | T |  |  |  |  |  |  |  |  |  |  |  | T | S |
| G | G | G | S |
| S | . | . | . |
|  |  |  |
| S |
|
|
| B |
| T | T | S | S | S | B |
|  |  | . |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
| . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
| . | . | . |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  | . |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
476 | . | . | . | 480 | . | . | . | |
|
. | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | |
|
|
. | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | |
. | . | . | 530 |
  |