Job Description P76085 Confidence 100.00% Date Thu Jan 5 12:18:37 GMT 2012 Rank 20 Aligned Residues 334 % Identity 20% Template c2v7bB_ PDB info PDB header:ligase Chain: B: PDB Molecule:benzoate-coenzyme a ligase; PDBTitle: crystal structures of a benzoate coa ligase from2 burkholderia xenovorans lb400 Resolution 1.84 Å

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		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	T	F	A	V	P	M	E	Q	V	V	R	I	H	A	S	S	G	T	T	G	K	P	T	V	V	G	Y	T	Q	N	D	I	D	N	W	A	N	I	V	A	R	S	L	R	A	A	G	G	S	P	K	D	K	I	H	V	A	Y	G	Y	G	L	F	T	G	G	L	G	A	H	Y	G	A	E	R	L	G	A	T
Query Conservation
Alig confidence																																															.	.
Template Conservation																																															.	.
Template Sequence		A	A	P	A	A	K	A	A	A	T	G	C	D	D	I	A	F	W	L	Y	S	K	P	K	G	T	V	H	T	H	A	N	L	Y	W	T	A	E	L	Y	A	K	P	I	L	.	.	G	I	A	E	N	D	V	V	F	S	A	A	K	L	F	F	A	Y	G	L	G	N	G	L	T	F	P	L	S	V	G	A	T
Template Known Secondary structure		S				S	S						T	T	S																										T						.	.				T	T						S	S		T	T	S								T							T
Template Predicted Secondary structure																																															.	.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.			.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		158	.	160	.	.		.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		V	I	P	M	S	.	G	G	Q	T	E	K	Q	A	Q	L	I	R	D	F	Q	P	D	M	I	M	V	T	P	S	Y	C	L	N	L	I	E	E	L	E	R	Q	L	G	G	D	A	S	G	C	S	L	R	V	G	V	F	G	A	E	P	W	T	Q	A	M	R	K	E	I	E	R	R	L	G	I	T	A	L	D
Query Conservation							.
Alig confidence							.																																								.	.	.
Template Conservation																																															.	.	.
Template Sequence		A	I	L	M	A	E	R	P	T	A	D	A	I	F	A	R	L	V	E	H	R	P	T	V	F	Y	G	V	P	T	L	Y	A	N	M	L	V	S	P	N	L	P	A	R	A	.	.	.	D	V	A	I	R	I	C	T	S	A	G	E	A	L	P	R	E	I	G	E	R	F	T	A	H	F	G	C	E	I	L	D
Template Known Secondary structure							S														T			S														T		T	T				G	G	.	.	.	G										S	S															S
Template Predicted Secondary structure																																															.	.	.
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.				.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.		.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.													.	.
Predicted Secondary structure																						.																																														.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.																																														.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	Y	G	L	S	E	V	M	G	P	G	V	A	M	E	C	L	E	T	T	.	D	G	P	T	I	W	E	D	H	F	Y	P	E	I	V	N	P	H	D	G	T	P	L	A	D	G	E	H	G	E	L	L	F	T	T	L	T	K	E	A	L	P	V	I	R	.	.	.	.	.	.	.	.	.	.	.	.	Y	R
Query Conservation																						.																																														.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.																	.																													.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.
Template Sequence		G	I	G	S	T	E	M	L	H	I	F	L	S	N	R	A	G	A	V	E	Y	G	T	T	G	R	P	V	P	G	Y	E	I	E	L	R	D	.	E	A	G	H	A	V	P	D	G	E	V	G	D	L	Y	I	K	G	P	S	A	A	V	M	Y	W	N	N	R	E	K	S	R	A	T	F	L	G	E	W	I	R
Template Known Secondary structure						T	T	T	S	S							T	T				T	T	S						T	T								.	T	T	S		B			T	T	S									T	T					B	T	T											T	T
Template Predicted Secondary structure																																							.
Template SS confidence
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.		.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	D	L	T	R	L	L	P	G	T	A	R	T	M	R	R	M	D	R	I	S	G	R	S	D	D	M	L	I	I	R	G	V	N	V	F	P	S	Q	L	E	E	E	I	V	K	F	E	H	L	S	P	H	Y	Q	L	E	V	N	R	R	G	H	L	D	S	L	S	V	K	V	E	L	K	E	S	S	L	T
Query Conservation
Alig confidence													.	.	.	.	.	.														.	.	.	.																														.
Template Conservation													.	.	.	.	.	.														.	.	.	.																														.
Template Sequence		S	G	D	K	Y	C	R	L	P	N	G	.	.	.	.	.	.	C	Y	V	Y	A	G	R	S	D	D	M	L	K	.	.	.	.	Y	V	S	P	V	E	V	E	M	V	L	V	Q	H	D	A	V	L	E	A	A	V	V	G	V	D	H	G	G	.	L	V	K	T	R	A	F	V	V	L	K	R	E	F	A	P
Template Known Secondary structure										T	T	S	.	.	.	.	.	.								G	G	G		B		.	.	.	.		B										T	T	S	T	T												T	T	.												T	T
Template Predicted Secondary structure													.	.	.	.	.	.														.	.	.	.																														.
Template SS confidence
		410	.	.	.	.	.	.	.	.	.	420							.	.	.	.	.	.	.	.	.	430	.	.	.					.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.		.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.
		384	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.		.	.	.	.	.	.	.	.	430	.	.	.
Predicted Secondary structure																																								.
Query SS confidence																																								.
Query Sequence		L	T	H	E	Q	R	C	Q	V	C	H	Q	L	R	H	R	I	K	S	M	V	G	I	S	T	D	V	M	I	V	N	C	G	S	I	P	R	S	.	E	G	K	A	C	R	V	F	D	L	R	N
Query Conservation																																								.
Alig confidence			.																							.	.	.												.								.
Template Conservation			.																							.	.	.																				.
Template Sequence		S	.	E	I	L	A	E	E	L	K	A	F	V	K	D	R	L	A	P	H	K	Y	P	R	.	.	.	D	I	V	F	V	D	D	L	P	K	T	A	T	G	K	I	Q	R	F	.	K	L	R	E
Template Known Secondary structure			.													T	T	S		T	T	S	S		S	.	.	.						S				B		T	T	S		B				.
Template Predicted Secondary structure			.																							.	.	.																				.
Template SS confidence
		483		.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.				.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.		.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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