Job Description P29131 Confidence 42.96% Date Thu Jan 5 11:45:35 GMT 2012 Rank 25 Aligned Residues 76 % Identity 9% Template c2adbA_ PDB info PDB header:rna binding protein/rna Chain: A: PDB Molecule:polypyrimidine tract-binding protein 1; PDBTitle: solution structure of polypyrimidine tract binding protein2 rbd2 complexed with cucucu rna Resolution UNK

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		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.			.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.			310	.	.	.	.	.
Predicted Secondary structure																																			.	.																																						.	.
Query SS confidence																																			.	.																																						.	.
Query Sequence		A	E	K	K	D	E	R	R	W	M	V	Q	C	G	S	F	R	G	A	E	Q	A	E	T	V	R	A	Q	L	A	F	E	G	.	.	F	D	S	K	I	T	T	N	N	G	W	N	R	V	V	I	G	P	V	K	G	K	E	N	A	D	S	T	L	N	R	L	K	M	A	G	H	.	.	T	N	C	I	R	L
Query Conservation																																			.	.																																						.	.
Alig confidence																																			.	.																	.																					.	.
Template Conservation																																																					.
Template Sequence		A	M	A	G	Q	S	P	V	L	R	I	I	V	E	N	L	F	Y	P	V	T	L	D	V	L	H	Q	I	F	S	K	F	G	T	V	L	K	I	I	T	F	T	K	N	N	Q	F	Q	A	L	L	.	Q	Y	A	D	P	V	S	A	Q	H	A	K	L	S	L	D	G	Q	N	I	Y	N	A	C	C	T	L	R
Template Known Secondary structure		S	S											S		S			S	T	T										T	T	T	S											T	T							.			S														S			S	S	T	T
Template Predicted Secondary structure																																																					.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		316
Predicted Secondary structure
Query SS confidence
Query Sequence		A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		255

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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