 |
Job Description | P33898 | Confidence | 99.90% | Date | Thu Jan 5 11:52:40 GMT 2012 |
Rank | 77 | Aligned Residues | 114 |
% Identity | 17% | Template | d2gz1a2 |
SCOP info | FwdE/GAPDH domain-like
| Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
| GAPDH-like
|
Resolution | 1.80 |
|
 |
  |   |
150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
C | T | T | N | C | L | A | P | M | A | K | A | L | H | D | S | F | G | I | E | V | G | T | M | T | T | I | H | A | Y | T | G | T | Q | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | V | D | G | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
R | G | K | D | L | R | A | S | R | A | A | A | E | N | I | I | P |
Query Conservation |   |
|
|
|   |   |
|
|
|   |
|
|   |
|   |   |   |
|
|
|   |   |   |   |
|
|
|
|
|
|   |
|   |   |
|   | . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|   |   | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|   |
|   |   |
|
|   |   |   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |
|   |   |   |
|   |
|
|   |   |   |   |   |
|   |
|
|   |
|
|
|
|
|
|
|
|
|
|
|   |   |
|
|   |
|
|   |   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|
|
|   |
|
|
Template Sequence |   |
C | S | T | I | Q | M | M | V | A | L | E | P | V | R | Q | K | W | G | L | D | R | I | I | V | S | T | Y | Q | A | V | S | G | A | G | M | G | A | I | L | E | T | Q | R | E | L | R | E | V | L | N | D | G | V | K | P | C | D | L | H | A | E | I | L | P | S | G | G | D | K | K | H | Y | P | I | A | F | N | A | L | P |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  | B |
| G | G | G | G |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| G | G | G |
|
|
| S | S | S | S |
| T | T | S | S |
|
|
|
|
| T | T |
|
| B |
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
128 | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . |
  |
  |   |
207 | . | . | 210 | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . |
Predicted Secondary structure |   |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | T | T | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | A | K | A | I | G | L | V | I | P | E | L | S | G | K | L | K | G | H | A | Q | R | V | P | V | K | T | G | S | V | T | E | L | V | S | I | L | G | K | K | V | T | A | E | E | V | N | N | A | L | K | Q | A |
Query Conservation |   |
  |   |
|
| . | . | . | . | . | . | . | . | . | . | . | . |   |
|
|   |
|   |   |
|
|
|   |
|   |
|
|
|   |
|   |
|
|
|
|
|
|   |   |   |
|   |   |
|
|   |
|   |   |   |   |   |   |
|   |
|
|
|   |   |   |
|
|   |
|
Alig confidence |   |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |   |   |   |
|   |
|   |
|
|   |
|   |   |   |
|   |
|
|
|
|   |   |   |   |
|   |
|
|   |
|
|
|
|
|
|
|   |   |
|
|
|   |
|
|   |
|
|   |   |   |   |   |   |   |
|   |
|   |   |   |
|   |   |   |
Template Sequence |   |
Q | I | D | V | F | T | D | N | D | Y | T | Y | E | E | M | K | M | T | K | E | T | K | K | I | M | E | D | D | S | I | A | V | S | A | T | C | V | R | I | P | V | L | S | A | H | S | E | S | V | Y | I | E | T | K | E | V | A | P | I | E | E | V | K | A | A | I | A | A | F |
Template Known Secondary structure |   |
|
| S |
| B |
| T | T | S | S | B |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| T | T | S |  |  |  |  |  |
|
| B |
| S |
| S | S |
|  |  |  |  |  |  |  |  |
| S | S |
|
|
|  |  |  |  |  |  |  |  |  | T | S |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
208 | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|