Return to main results Retrieve Phyre Job Id

Job DescriptionP33898
Confidence100.00%DateThu Jan 5 11:52:40 GMT 2012
Rank49Aligned Residues165
% Identity41%Templated1rm4a1
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20..... ....30.........40.........50.........60.... .....70.........
Predicted Secondary structure 





.

















.




Query SS confidence 























.






































.














Query Sequence  SKVGINGFGRIGRLVLGRLLEVKS. NIDVVAINDLTSPKILAYLLKHDSNYGPFPWSVDFTEDS. LIVDGKSIAVYAEKE
Query Conservation 












 


 


   . 







       



  

  
     
      .
 
 
  
 
     
Alig confidence 























.






































.














Template Conservation 












 



        
 





       



 





 
   
    
  
 


  
 
     
Template Sequence  LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDRN
Template Known Secondary structure 


S
SS
S

TT


TTT
S
SS

TTSTT

S
Template Predicted Secondary structure 

































Template SS confidence 















































































   1........10.........20.........30.........40.........50.........60.........70.........80
 
   80.........90.........100.........110.........120... ......130.........140.........150. ....
Predicted Secondary structure 























.
















...
Query SS confidence 











































.



























. . .



Query Sequence  AKNIPWKAKGAEIIVECTGFYTSAEKSQAHLDAGAKKVLISAPA. GEMKTIVYNVNDDTLDGNDTIVSVASCT. . . TNCL
Query Conservation 
  
 
   






 

 
     
  

 



 





 . 


 

 


         







...
  
Alig confidence 











































.



























...



Template Conservation 
  


   






 

 
     
  

  









      
 
 


   
     


 



   

 
Template Sequence  PVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNEEGYTHADTIISNASNEWGYSQRV
Template Known Secondary structure  GGGS
T


SSS

BTT
S
SS

BSS

B

TTTTGGG

TT
S




Template Predicted Secondary structure 






































Template SS confidence 















































































   7980.........90.........100.........110.........120.........130.........140.........150........
 
   156...160......
Predicted Secondary structure 
Query SS confidence 










Query Sequence  APMAKALHDSF
Query Conservation 

 

 
   
Alig confidence 










Template Conservation 


 


   
Template Sequence  VDLADIVANKW
Template Known Secondary structure  T
Template Predicted Secondary structure 
Template SS confidence 










   322.......330..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions