Return to main results Retrieve Phyre Job Id

Job DescriptionP33898
Confidence100.00%DateThu Jan 5 11:52:40 GMT 2012
Rank50Aligned Residues164
% Identity40%Templated1ggaa1
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
Resolution3.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.... .....30..... ....40.........50.........60. ........
Predicted Secondary structure 




...



.












........



Query SS confidence 






















. . .










.

























. . . . . . . .







Query Sequence  SKVGINGFGRIGRLVLGRLLEVK. . . SNIDVVAINDL. TSPKILAYLLKHDSNYGPFPWSVDFT. . . . . . . . EDSLIVDG
Query Conservation 












 


 


  ...  







 .      



  

  
     
   ........   
 
 
Alig confidence 






















...










.

























........







Template Conservation 












 


           







        



 


 

 
   
              
 


Template Sequence  IKVGINGFGRIGRMVFQALCDDGLLGNEIDVVAVVDMNTDARYFAYQMKYDSVHGKFKHSVSTTKSKPSVAKDDTLVVNG
Template Known Secondary structure  S
STTT
BTTTS


TTT
SS

SSTT
SS

TT
Template Predicted Secondary structure 








































Template SS confidence 















































































   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   70... ......80.........90.........100.........110.........120...... ...130......... 140......
Predicted Secondary structure  .





























.





.



Query SS confidence 



.




















































.












.






Query Sequence  KSIA. VYAEKEAKNIPWKAKGAEIIVECTGFYTSAEKSQAHLDAGAKKVLISAPAGEM. KTIVYNVNDDTLD. GNDTIVS
Query Conservation    
 .
     
  
 
   






 

 
     
  

 



 





  

.
 

 


     .    


Alig confidence 



.




















































.












.






Template Conservation    
  
    

  


   









 
     
  

  









      
 
 


   
      


Template Sequence  HRILCVKAQRNPADLPWGKLGVEYVIESTGLFTVKSAAEGHLRGGARKVVISAPASGGAKTFVMGVNHNNYNPREQHVVS
Template Known Secondary structure 

SSGGGS
T


SSS

BTT
SSS

BSS


TTTTTT


TTT
S
Template Predicted Secondary structure 





































Template SS confidence 















































































   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   147..150.........160.....
Predicted Secondary structure 



Query SS confidence 


















Query Sequence  VASCTTNCLAPMAKALHDS
Query Conservation 





  


 

 
   
Alig confidence 


















Template Conservation 






 



 


   
Template Sequence  NASNEWGYSHRVVDLVRHM
Template Known Secondary structure 




Template Predicted Secondary structure 


Template SS confidence 


















   162.......170.........180
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions