Job Description P33898 Confidence 96.92% Date Thu Jan 5 11:52:40 GMT 2012 Rank 170 Aligned Residues 168 % Identity 20% Template c3qy9C_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:dihydrodipicolinate reductase; PDBTitle: the crystal structure of dihydrodipicolinate reductase from2 staphylococcus aureus Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	V	G	I	N	G	F	G	R	I	G	R	L	V	L	G	R	L	L	E	V	K	S	N	I	D	V	V	A	I	N	D	L	T	S	P	K	I	L	A	Y	L	L	K	H	D	S	N	Y	G	P	F	P	W	S	V	D	F	T	E	D	S	L	I	V	D	G	K	S	I	A	V	Y	A	E	K	E	A	K
Query Conservation
Alig confidence																							.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	K	I	L	L	I	G	Y	G	A	M	N	Q	R	V	A	R	L	A	E	E	.	.	K	G	H	E	I	V	G	V	I	E	N	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	K	A	T	T	P	Y	Q	Q	Y	Q	H	I	A
Template Known Secondary structure										S													.	.	T	T									S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T			S				S		G	G
Template Predicted Secondary structure																							.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.			.	.	.	.	.	.	.	.	30	.	.	.																																.	.	.	.	.	.	40	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.													.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	I	P	W	K	A	K	G	A	E	I	I	V	E	C	T	G	F	Y	T	S	A	E	K	S	Q	A	H	L	D	A	G	A	K	K	V	L	I	S	A	P	A	.	.	.	.	.	.	.	.	.	.	.	.	G	E	M	K	T	I	V	Y	N	V	N	D	D	T	L	D	G	N	D	T	I	V	S	V	A	S
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.																					.	.														.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.																					.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	V	K	.	.	.	.	G	A	D	V	A	I	D	F	S	N	P	N	L	L	F	P	L	L	D	E	.	.	D	F	H	L	P	L	V	V	A	T	T	G	E	K	E	K	L	L	N	K	L	D	E	L	S	Q	N	M	P	V	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	S	A	N	M	S
Template Known Secondary structure		G		T	.	.	.	.	T										G	G	G		G	G	G	G		S	.	.	S											S													T	T	T	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S
Template Predicted Secondary structure					.	.	.	.																					.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		48	.	50					.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70			.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.															.	.	.	.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		C	T	T	N	C	L	A	P	M	A	K	A	L	H	D	S	F	G	I	E	V	G	T	M	T	T	I	H	A	Y	T	G	T	Q	S	L	V	D	G	P	R	G	K	D	L	R	A	S	R	A	A	A	E	N	I	I	P	H	T	T	G	A	A	K	A	I	G	L	V	I	P	E	L	S	G	K	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	G	V	H	A	L	T	K	I	L	A	A	A	V	P	L	L	D	D	F	D	I	E	L	T	E	A	H	.	.	.	.	.	.	.	.	.	.	H	N	K	K	V	D	A	.	.	.	.	.	.	.	.	.	.	.	.	.	P	S	G	T	L	E	K	L	Y	D	V	I	V	S	L	K	E	N	V	T	P	V
Template Known Secondary structure																		T	T	T	S									.	.	.	.	.	.	.	.	.	.		T	T			S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	S																S
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.											.	.	.	.	140	.	.														.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
																226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	K	G	H	A	Q	R	V	P	V	K	T	G	S	V	T	E	L	V	S
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	D	R	H	E	L	N	E	K	R	Q	P	Q	D	I	G	I	H	S	I	R	G	G	T	I	V	G	E	H	E	V	L	F	A
Template Known Secondary structure					T	T	T						T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions