Return to main results Retrieve Phyre Job Id

Job DescriptionP33898
Confidence95.72%DateThu Jan 5 11:52:40 GMT 2012
Rank213Aligned Residues98
% Identity15%Templatec3oa0B_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:lipopolysaccaride biosynthesis protein wbpb; PDBTitle: crystal structure of the wlba (wbpb) dehydrogenase from thermus2 thermophilus in complex with nad and udp-glcnaca
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........ 10.........20.........30.........40.........50.........60.........70.........
Predicted Secondary structure 


.


























Query SS confidence 








.





































































Query Sequence  MSKVGINGF. GRIGRLVLGRLLEVKSNIDVVAINDLTSPKILAYLLKHDSNYGPFPWSVDFTEDSLIVDGKSIAVYAEKE
Query Conservation 








.




 


 


    







       



  

  
     
      
 
 
  
 
     
Alig confidence 








.











.














































..........
Template Conservation 
 
 



 

 
   
  

 .                         
               
     ..........
Template Sequence  MTRFALTGLAGYIAPRHLKAIK. EVGGVLVASLDPATNVGLVDSFFPEAEFFTEPEAFEAYLEDLRDRGE. . . . . . . . . .
Template Known Secondary structure 


TTSSS.TT

SS


GGGGGT
TT
S
TT
..........
Template Predicted Secondary structure 



.










..........
Template SS confidence 















































































   1........10.........20.. .......30.........40.........50.........60.........
 
   80.........90.........100.........110........
Predicted Secondary structure 



















Query SS confidence 






































Query Sequence  AKNIPWKAKGAEIIVECTGFYTSAEKSQAHLDAGAKKVL
Query Conservation 
  
 
   






 

 
     
  

 



 

Alig confidence  .........





























Template Conservation  ......... 



 
 

   
      

 




  
Template Sequence  . . . . . . . . . GVDYLSIASPNHLHYPQIRMALRLGANALS
Template Known Secondary structure  .........

S
S
GGGTT
Template Predicted Secondary structure  .........











Template SS confidence 






































   70.........80.........90.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions