Job Description P33898 Confidence 98.58% Date Thu Jan 5 11:52:40 GMT 2012 Rank 95 Aligned Residues 183 % Identity 20% Template c3ijpA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:dihydrodipicolinate reductase; PDBTitle: crystal structure of dihydrodipicolinate reductase from2 bartonella henselae at 2.0a resolution Resolution 2.30 Å

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		2	.	.	.	.	.	.	.		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		S	K	V	G	I	N	G	F	.	G	R	I	G	R	L	V	L	G	R	L	L	E	V	K	S	N	I	D	V	V	A	I	N	D	L	T	S	P	K	I	L	A	Y	L	L	K	H	D	S	N	Y	G	P	F	P	W	S	V	D	F	T	E	D	S	L	I	V	D	G	K	S	I	A	V	Y	A	E	K	E	A
Query Conservation										.
Alig confidence										.													.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	R	L	T	V	V	G	A	N	G	R	M	G	R	E	L	I	T	A	I	Q	.	R	R	K	D	V	E	L	C	A	V	L	V	R	K	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	F	V	D	K	D	A	S	I	L	I	G	S	D	F	L	G	V	R	I	T	D	D	P
Template Known Secondary structure							S	S	T	T	S												.	T		S	S							B			T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T	T	S	B	G	G	G	G	T	T		S			S		B		B	S
Template Predicted Secondary structure																							.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.																			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.							140	.	.	.	.	.			.	.	.	.	150	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.							.	.
Query SS confidence																																																													.	.	.	.	.	.							.	.
Query Sequence		K	N	I	P	W	K	A	K	G	A	E	I	I	V	E	C	T	G	F	Y	T	S	A	E	K	S	Q	A	H	L	D	A	G	A	K	K	V	L	I	S	A	P	A	G	E	M	K	T	I	V	Y	N	V	N	D	D	T	L	D	.	.	.	.	.	.	G	N	D	T	I	V	.	.	S	V	A	S	C	T	T
Query Conservation																																																													.	.	.	.	.	.							.	.
Alig confidence					.	.	.																																				.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.							.	.
Template Conservation					.	.	.																																				.	.	.	.	.	.	.	.	.	.
Template Sequence		E	S	A	.	.	.	F	S	N	T	E	G	I	L	D	F	S	Q	P	Q	A	S	V	L	Y	A	N	Y	A	A	Q	K	S	L	I	H	I	I	G	T	T	.	.	.	.	.	.	.	.	.	.	G	F	S	K	T	E	E	A	Q	I	A	D	F	A	K	Y	T	T	I	V	K	S	G	N	M	S	L	G	V
Template Known Secondary structure					.	.	.	T	T	S		S						S																T									.	.	.	.	.	.	.	.	.	.															T	T	S						S
Template Predicted Secondary structure					.	.	.																																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		62	.	.				.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.											100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																			.																																																								.	.	.	.	.	.	.
Query SS confidence																			.																																																								.	.	.	.	.	.	.
Query Sequence		N	C	L	A	P	M	A	K	A	L	H	D	S	F	G	I	E	.	V	G	T	M	T	T	I	H	A	Y	T	G	T	Q	S	L	V	D	G	P	R	G	K	D	L	R	A	S	R	A	A	A	E	N	I	I	P	H	T	T	G	A	A	K	A	I	G	L	V	I	P	E	L	S	G	.	.	.	.	.	.	.
Query Conservation																			.																																																								.	.	.	.	.	.	.
Alig confidence																			.									.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	L	L	A	N	L	V	K	R	A	A	K	A	L	D	D	D	F	D	I	E	I	Y	E	M	H	.	.	.	.	.	.	.	.	.	.	H	A	N	K	V	D	S	.	.	.	.	.	.	.	.	.	.	.	.	.	P	S	G	T	A	L	L	L	G	Q	A	A	A	E	G	R	N	I	M	L	K	N	V	S
Template Known Secondary structure															S		T	T	S									.	.	.	.	.	.	.	.	.	.		T	T				S	.	.	.	.	.	.	.	.	.	.	.	.	.	S															T	T	S
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.											.	.	.	.	.	160	.														.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
																225	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	L	K	G	H	A	Q	R	V	P	V	K	T	G	S
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	N	G	R	S	G	H	T	G	K	R	E	K	G	T	I	G	F	A	C	S	R	G	G	T	V	I	G	D
Template Known Secondary structure					G	G	G			S				T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions