Job Description P33898 Confidence 90.32% Date Thu Jan 5 11:52:40 GMT 2012 Rank 373 Aligned Residues 96 % Identity 17% Template c3hdjA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:probable ornithine cyclodeaminase; PDBTitle: the crystal structure of probable ornithine cyclodeaminase from2 bordetella pertussis tohama i Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	G	I	N	G	F	G	R	I	G	R	L	V	L	G	R	L	L	E	V	K	S	N	I	D	V	V	A	I	N	D	L	T	S	P	K	I	L	A	Y	L	L	K	H	D	S	N	Y	G	P	F	P	W	S	V	D	F	T	E	D	S	L	I	V	D	G	K	S	I	A	V	Y	A	E	K	E	A	K	N
Query Conservation
Alig confidence																									.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	L	G	L	F	G	A	G	T	Q	G	A	E	H	A	A	Q	L	S	A	R	F	A	.	L	E	A	I	L	V	H	D	P	Y	A	S	P	E	I	L	E	R	I	G	R	R	C	G	V	P	A	R	X	A	A	P	A	D	I	A	A	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									S														S		.									T	T														T	S														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																									.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	W	K	A	K	G	A	E	I	I	V	E	C	T	G	F	Y	T	S	A	E	K	S	Q	A	H	L	D	A	G	A	K	K	V	L	I	S	A	P	A	G	E
Query Conservation
Alig confidence		.	.	.	.	.	.	.											.
Template Conservation		.	.	.	.	.	.	.											.
Template Sequence		.	.	.	.	.	.	.	A	D	I	V	V	T	A	T	R	S	.	T	T	P	L	F	A	G	Q	A	L	R	A	G	A	F	V	G	A	I	G	S	S	L	P	H
Template Known Secondary structure		.	.	.	.	.	.	.		S									.	S	S		S	S		G	G	G			T	T									S	S	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.											.
Template SS confidence
									181	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions