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Job DescriptionP33898
Confidence100.00%DateThu Jan 5 11:52:40 GMT 2012
Rank17Aligned Residues323
% Identity40%Templatec2x5kO_
PDB info PDB header:oxidoreductaseChain: O: PDB Molecule:d-erythrose-4-phosphate dehydrogenase; PDBTitle: structure of an active site mutant of the d-erythrose-4-phosphate2 dehydrogenase from e. coli
Resolution2.37 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  SKVGINGFGRIGRLVLGRLLEV. . KSNIDVVAINDLTSPKILAYLLKHDSNYGPFPWSVDFTEDSLIVDGKSIAVYAEKE
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Template Sequence  VRVAINGFGRIGRNVVRALYESGRRAEITVVAINELADAAGMAHLLKYDTSHGRFAWEVRQERDQLFVGDDAIRVLHERS
Template Known Secondary structure 

STSGGGT
SS


TTT
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SS
TTTT

SS
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Query Sequence  AKNIPWKAKGAEIIVECTGFYTSAEKSQAHLDAGAKKVLISAPAGE. . MKTIVYNVNDDTLDGNDTIVSVASCTTNCLAP
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Template Sequence  LQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAEHRIVSNASATTNSIIP
Template Known Secondary structure  GGG

TTTTT
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SS

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TTTSGGG

TT




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   158.160.........170.........180.........190.........200.........210.........220.........230.......
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Query Sequence  MAKALHDSFGIEVGTMTTIHAYTGTQSLVDGPRGKDLRASRAAAENIIPHTTGAAKAIGLVIPELSGKLKGHAQRVPVKT
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Template Sequence  VIKLLDDAYGIESGTVTTIHSAMHDQQVI. . . . . . DLRRTRAASQSIIPVDTKLAAGITRFFPQFNDRFEAIAVRVPTIN
Template Known Secondary structure 
TT


S

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   157..160.........170.........180..... ....190.........200.........210.........220.........230
 
   238.240.........250.........260...... ...270.........280.........290.........300.........310.....
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Query Sequence  GSVTELVSILGKKVTAEEVNNALKQATTN. . NESFGYTDEEIVSSDIIGSHFGSVFDATQTEITAVGDLQLVKTVAWYDN
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Template Sequence  VTAIDLSVTVKKPVKANEVNLLLQKAAQGAFHGIVDYTELPLVSVDFNHDPHSAIVDGTQTRVS. . . GAHLIKTLVWCDN
Template Known Secondary structure  SS


TTTTTT
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   237..240.........250.........260.........270.........280.........290.........300 .........310...
 
   316...320.........330...
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Query Sequence  EYGFVTQLIRTLEKFAKL
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Template Sequence  EWGFANRMLDTTLAMATV
Template Known Secondary structure  T
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   314.....320.........330.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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