Job Description P33898 Confidence 100.00% Date Thu Jan 5 11:52:40 GMT 2012 Rank 65 Aligned Residues 278 % Identity 17% Template c2q49B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:probable n-acetyl-gamma-glutamyl-phosphate reductase; PDBTitle: ensemble refinement of the protein crystal structure of gene product2 from arabidopsis thaliana at2g19940 Resolution 2.19 Å

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		2	.	.	.	.	.	.		.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		S	K	V	G	I	N	G	.	F	G	R	I	G	R	L	V	L	G	R	L	L	E	V	K	S	N	I	D	V	V	A	I	N	D	L	T	S	P	K	I	L	A	Y	L	L	K	H	D	S	N	Y	G	P	F	P	W	S	V	D	F	T	E	D	S	L	I	V	D	G	K	S	I	A	V	Y	A	E	K	E	A
Query Conservation									.
Alig confidence									.											.															.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.
Template Conservation																				.															.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.
Template Sequence		I	R	I	G	L	L	G	A	S	G	Y	T	G	A	E	I	V	R	.	L	L	A	N	H	P	H	F	Q	V	T	L	M	T	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	R	K	A	G	Q	S	M	E	S	V	F	P	H	.	.	.	.	.	L	R	A	Q	K	L	P	T	L	V	S	V	K	D
Template Known Secondary structure									T	T	S									.				T		S	S								.	.	.	.	.	.	.	.	.	.	.	.	.		G	G	G	T	T	S		G	G	G	T		G	G	.	.	.	.	.	G	T	T	S						B		T	T	T
Template Predicted Secondary structure																				.															.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.														.	50	.	.	.	.	.	.	.	.	.	60	.	.	.						.	.	.	.	.	.	70	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.												.	.	.	.	.	130	.	.	.	.	.	.	.	.											.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.
Query Sequence		K	N	I	P	W	K	A	K	G	A	E	I	I	V	E	C	T	G	F	Y	T	S	A	E	K	S	Q	A	H	L	D	A	G	A	K	K	V	L	I	S	A	P	A	G	.	.	.	.	.	.	.	.	.	.	.	E	M	K	T	I	V	Y	N	V	N	D	D	T	L	.	.	.	.	.	.	.	.	.	.	D
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.																				.																	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.																				.
Template Sequence		A	D	F	S	.	.	.	.	T	V	D	A	V	F	C	C	L	P	H	G	T	T	Q	E	I	I	K	.	E	L	P	T	A	L	K	I	V	D	L	S	A	D	F	R	L	R	N	I	A	E	Y	E	E	W	Y	G	Q	P	H	K	A	V	E	L	Q	K	E	V	V	Y	G	L	T	E	I	L	R	E	D	I
Template Known Secondary structure		S		T	T	.	.	.	.	S		S								T	T	S							.	T	S		S	S							S	S	T	T	T		S										S	S			S						T	T
Template Predicted Secondary structure						.	.	.	.																				.
Template SS confidence
		78	.	80	.					.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.			170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.
Query SS confidence																																.	.
Query Sequence		G	N	D	T	I	V	S	V	A	S	C	T	T	N	C	L	A	P	M	A	K	A	L	H	D	S	F	G	I	E	.	.	V	G	T	M	T	T	I	H	A	Y	T	G	T	Q	S	L	V	D	G	P	R	G	K	D	L	R	A	S	R	A	A	A	E	N	I	I	P	H	T	T	G	A	A	K	A	I	G	L
Query Conservation																																.	.
Alig confidence																																.	.																													.	.	.	.	.
Template Conservation																																																														.	.	.	.	.
Template Sequence		K	K	A	R	L	V	A	N	P	G	C	Y	P	T	T	I	Q	L	P	L	V	P	L	L	K	A	N	L	I	K	H	E	N	I	I	I	D	A	K	S	G	V	S	G	A	G	R	G	A	K	E	A	N	L	Y	S	E	I	A	E	.	.	.	.	.	G	I	S	S	Y	G	V	T	R	H	R	H	V	P	E
Template Known Secondary structure					S																						T	T		B		S	S	S									G	G	G	G		S				G	G	G						T	T	.	.	.	.	.						S		S			T
Template Predicted Secondary structure																																																														.	.	.	.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.						.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		218	.	220	.	.	.							.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.				.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.																																																					.	.	.
Query SS confidence								.	.	.	.	.	.																																																					.	.	.
Query Sequence		V	I	P	E	L	S	.	.	.	.	.	.	G	K	L	K	G	H	A	Q	R	V	P	V	K	T	G	S	V	T	E	L	V	S	I	L	G	K	K	V	T	A	E	E	V	N	N	A	L	K	Q	A	T	T	N	N	E	S	F	G	Y	T	D	E	.	.	.	E	I	V	S	S	D	I	I	G	S	H	F	G
Query Conservation								.	.	.	.	.	.																																																					.	.	.
Alig confidence								.	.	.	.	.	.																																																					.	.	.
Template Conservation
Template Sequence		I	E	Q	G	L	S	D	V	A	Q	S	K	V	T	V	S	F	T	P	H	L	M	P	M	I	R	G	M	Q	S	T	I	Y	V	E	M	A	P	G	V	R	T	E	D	L	H	Q	Q	L	K	T	S	Y	E	D	E	E	F	V	K	V	L	D	E	G	V	V	P	R	T	H	N	V	R	G	S	N	Y	C	H
Template Known Secondary structure											T	S												S	S	S	S										B		T	T															S	S		S	S						T	T					G	G	G	G	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	F	D	A	T	Q	T	E	I	T	A	V	G	D	L	Q	L	V	K	T	V	A	W	Y	D	N
Query Conservation
Alig confidence									.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.
Template Sequence		M	S	V	F	P	D	R	.	.	.	.	.	.	.	I	P	G	R	A	I	I	I	S	V	I	D	N
Template Known Secondary structure								S	.	.	.	.	.	.	.	S	T	T										T
Template Predicted Secondary structure									.	.	.	.	.	.	.
Template SS confidence
		308	.	310	.	.	.	.								.	.	.	.	.	320	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions