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Job DescriptionP33898
Confidence100.00%DateThu Jan 5 11:52:40 GMT 2012
Rank12Aligned Residues327
% Identity45%Templatec2pkrI_
PDB info PDB header:oxidoreductaseChain: I: PDB Molecule:glyceraldehyde-3-phosphate dehydrogenase aor; PDBTitle: crystal structure of (a+cte)4 chimeric form of2 photosyntetic glyceraldehyde-3-phosphate dehydrogenase,3 complexed with nadp
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  SKVGINGFGRIGRLVLGRLLE. VKSNIDVVAINDLTSPKILAYLLKHDSNYGPFPWSVDF. TEDSLIVDGKSIAVYAEKE
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Template Sequence  LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDRN
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TTT
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TTSTT

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Query Sequence  AKNIPWKAKGAEIIVECTGFYTSAEKSQAHLDAGAKKVLISAPAGE. MKTIVYNVNDDTLDGNDTIVSVASCTTNCLAPM
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Template Sequence  PVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLAPF
Template Known Secondary structure  GGGS
T


SSS

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B

TTTTGGG

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Query Sequence  AKALHDSFGIEVGTMTTIHAYTGTQSLVDGPRGKDLRASRAAAENIIPHTTGAAKAIGLVIPELSGKLKGHAQRVPVKTG
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Template Sequence  VKVLDQKFGIIKGTMTTTHSYTGDQRLLDASH. RDLRRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNV
Template Known Secondary structure  T


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Query Sequence  SVTELVSILGKKVTAEEVNNALKQATTN. . NESFGYTDEEIVSSDIIGSHFGSVFDATQTEITAVGDLQLVKTVAWYDNE
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Template Sequence  SVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSIDFRCTDVSSTIDSSLTMVM. . . GDDMVKVIAWYDNE
Template Known Secondary structure  SS


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   238.240.........250.........260.........270.........280.........290.........300 .........310....
 
   317..320.........330..
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Query Sequence  YGFVTQLIRTLEKFAK
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Template Sequence  WGYSQRVVDLADIVAN
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   315....320.........330
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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